Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC006970.2-201ENST00000450065 779 ntBASIC20.68■□□□□ 0.9
LIMK2P53671 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LIMK2P53671 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LIMK2P53671 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LIMK2P53671 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
LIMK2P53671 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
LIMK2P53671 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LIMK2P53671 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LIMK2P53671 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LIMK2P53671 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.68■□□□□ 0.9
LIMK2P53671 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.68■□□□□ 0.9
LIMK2P53671 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LIMK2P53671 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LIMK2P53671 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LIMK2P53671 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.67■□□□□ 0.9
LIMK2P53671 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.67■□□□□ 0.9
LIMK2P53671 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LIMK2P53671 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LIMK2P53671 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LIMK2P53671 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LIMK2P53671 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LIMK2P53671 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIMK2P53671 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.66■□□□□ 0.9
LIMK2P53671 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LIMK2P53671 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LIMK2P53671 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIMK2P53671 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIMK2P53671 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIMK2P53671 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LIMK2P53671 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.66■□□□□ 0.9
LIMK2P53671 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIMK2P53671 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.66■□□□□ 0.9
LIMK2P53671 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIMK2P53671 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LIMK2P53671 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.66■□□□□ 0.9
LIMK2P53671 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIMK2P53671 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.66■□□□□ 0.9
LIMK2P53671 AC020907.5-201ENST00000624372 1936 ntBASIC20.66■□□□□ 0.9
LIMK2P53671 AC011484.1-201ENST00000377652 1995 ntBASIC20.66■□□□□ 0.9
LIMK2P53671 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIMK2P53671 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LIMK2P53671 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.65■□□□□ 0.9
LIMK2P53671 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
LIMK2P53671 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIMK2P53671 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIMK2P53671 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.65■□□□□ 0.9
LIMK2P53671 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIMK2P53671 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIMK2P53671 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LIMK2P53671 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LIMK2P53671 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.65■□□□□ 0.9
LIMK2P53671 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.65■□□□□ 0.9
LIMK2P53671 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.65■□□□□ 0.9
LIMK2P53671 MFSD11-216ENST00000590393 1141 ntBASIC20.65■□□□□ 0.9
LIMK2P53671 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIMK2P53671 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.65■□□□□ 0.9
LIMK2P53671 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIMK2P53671 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.64■□□□□ 0.89
LIMK2P53671 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LIMK2P53671 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LIMK2P53671 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.64■□□□□ 0.89
LIMK2P53671 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.64■□□□□ 0.89
LIMK2P53671 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LIMK2P53671 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.64■□□□□ 0.89
LIMK2P53671 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.64■□□□□ 0.89
LIMK2P53671 AC104771.1-201ENST00000603335 964 ntBASIC20.64■□□□□ 0.89
LIMK2P53671 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LIMK2P53671 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.64■□□□□ 0.89
LIMK2P53671 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LIMK2P53671 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LIMK2P53671 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LIMK2P53671 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LIMK2P53671 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.63■□□□□ 0.89
LIMK2P53671 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.63■□□□□ 0.89
LIMK2P53671 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LIMK2P53671 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LIMK2P53671 FP700111.2-201ENST00000619190 1892 ntBASIC20.63■□□□□ 0.89
LIMK2P53671 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LIMK2P53671 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LIMK2P53671 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.63■□□□□ 0.89
LIMK2P53671 NCF1B-203ENST00000435988 1254 ntBASIC20.63■□□□□ 0.89
LIMK2P53671 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.63■□□□□ 0.89
LIMK2P53671 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.63■□□□□ 0.89
LIMK2P53671 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.63■□□□□ 0.89
LIMK2P53671 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LIMK2P53671 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LIMK2P53671 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.63■□□□□ 0.89
LIMK2P53671 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LIMK2P53671 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIMK2P53671 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LIMK2P53671 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.62■□□□□ 0.89
LIMK2P53671 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LIMK2P53671 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIMK2P53671 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LIMK2P53671 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LIMK2P53671 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.62■□□□□ 0.89
LIMK2P53671 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIMK2P53671 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.62■□□□□ 0.89
LIMK2P53671 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.62■□□□□ 0.89
LIMK2P53671 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms