Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SLC25A1P53007 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC25A1P53007 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC25A1P53007 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SLC25A1P53007 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC25A1P53007 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SLC25A1P53007 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SLC25A1P53007 AC123595.1-201ENST00000440769 1046 ntBASIC18.23■□□□□ 0.51
SLC25A1P53007 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SLC25A1P53007 KRT18P20-201ENST00000548986 1279 ntBASIC18.23■□□□□ 0.51
SLC25A1P53007 SLC7A5P2-201ENST00000553010 536 ntBASIC18.23■□□□□ 0.51
SLC25A1P53007 CCDC92B-201ENST00000575506 885 ntBASIC18.23■□□□□ 0.51
SLC25A1P53007 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC25A1P53007 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.23■□□□□ 0.51
SLC25A1P53007 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC25A1P53007 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC25A1P53007 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC25A1P53007 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC25A1P53007 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SLC25A1P53007 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC25A1P53007 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC25A1P53007 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC25A1P53007 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC25A1P53007 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC25A1P53007 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC25A1P53007 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC25A1P53007 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC25A1P53007 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC25A1P53007 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC25A1P53007 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC25A1P53007 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC25A1P53007 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC25A1P53007 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
SLC25A1P53007 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC25A1P53007 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SLC25A1P53007 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC25A1P53007 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC25A1P53007 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC25A1P53007 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SLC25A1P53007 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SLC25A1P53007 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC25A1P53007 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SLC25A1P53007 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC25A1P53007 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC25A1P53007 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC25A1P53007 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SLC25A1P53007 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC25A1P53007 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC25A1P53007 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC25A1P53007 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC25A1P53007 AL391422.3-201ENST00000603791 2761 ntBASIC18.21■□□□□ 0.51
SLC25A1P53007 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC25A1P53007 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC25A1P53007 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
SLC25A1P53007 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC25A1P53007 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC25A1P53007 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SLC25A1P53007 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SLC25A1P53007 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
SLC25A1P53007 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC25A1P53007 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC25A1P53007 TERF1P2-201ENST00000583350 1212 ntBASIC18.2■□□□□ 0.5
SLC25A1P53007 AC243732.1-201ENST00000612648 864 ntBASIC18.2■□□□□ 0.5
SLC25A1P53007 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC25A1P53007 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC25A1P53007 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC25A1P53007 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC25A1P53007 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
SLC25A1P53007 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC25A1P53007 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC25A1P53007 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC25A1P53007 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC25A1P53007 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC25A1P53007 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC25A1P53007 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC25A1P53007 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SLC25A1P53007 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC25A1P53007 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC25A1P53007 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC25A1P53007 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC25A1P53007 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC25A1P53007 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC25A1P53007 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC25A1P53007 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC25A1P53007 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SLC25A1P53007 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC25A1P53007 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SLC25A1P53007 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC25A1P53007 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.19■□□□□ 0.5
SLC25A1P53007 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC25A1P53007 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC25A1P53007 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC25A1P53007 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC25A1P53007 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC25A1P53007 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC25A1P53007 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC25A1P53007 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC25A1P53007 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC25A1P53007 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SLC25A1P53007 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms