Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC006128.1-201ENST00000624704 1661 ntBASIC19.84■□□□□ 0.77
RAB28P51157 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB28P51157 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB28P51157 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB28P51157 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
RAB28P51157 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB28P51157 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB28P51157 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB28P51157 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB28P51157 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RAB28P51157 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB28P51157 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB28P51157 PGM5P4-201ENST00000421970 445 ntBASIC19.84■□□□□ 0.77
RAB28P51157 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB28P51157 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB28P51157 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB28P51157 AC087633.2-202ENST00000565166 1439 ntBASIC19.84■□□□□ 0.77
RAB28P51157 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB28P51157 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RAB28P51157 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB28P51157 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RAB28P51157 CLDN5-201ENST00000403084 2357 ntBASIC19.83■□□□□ 0.77
RAB28P51157 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAB28P51157 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB28P51157 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB28P51157 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB28P51157 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB28P51157 MIPEPP3-201ENST00000412105 444 ntBASIC19.83■□□□□ 0.77
RAB28P51157 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB28P51157 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.83■□□□□ 0.77
RAB28P51157 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.83■□□□□ 0.76
RAB28P51157 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB28P51157 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB28P51157 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB28P51157 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.83■□□□□ 0.76
RAB28P51157 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB28P51157 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
RAB28P51157 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB28P51157 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.82■□□□□ 0.76
RAB28P51157 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB28P51157 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RAB28P51157 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB28P51157 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
RAB28P51157 KRT18P68-201ENST00000392293 1000 ntBASIC19.82■□□□□ 0.76
RAB28P51157 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB28P51157 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB28P51157 BX276092.2-201ENST00000417668 665 ntBASIC19.82■□□□□ 0.76
RAB28P51157 AL355472.2-201ENST00000422958 438 ntBASIC19.82■□□□□ 0.76
RAB28P51157 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.82■□□□□ 0.76
RAB28P51157 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
RAB28P51157 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.82■□□□□ 0.76
RAB28P51157 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
RAB28P51157 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RAB28P51157 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RAB28P51157 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.82■□□□□ 0.76
RAB28P51157 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RAB28P51157 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB28P51157 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.82■□□□□ 0.76
RAB28P51157 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB28P51157 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.82■□□□□ 0.76
RAB28P51157 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.82■□□□□ 0.76
RAB28P51157 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.82■□□□□ 0.76
RAB28P51157 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.82■□□□□ 0.76
RAB28P51157 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB28P51157 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RAB28P51157 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB28P51157 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB28P51157 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.81■□□□□ 0.76
RAB28P51157 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB28P51157 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB28P51157 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB28P51157 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB28P51157 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.81■□□□□ 0.76
RAB28P51157 AC142086.2-201ENST00000569753 217 ntBASIC19.81■□□□□ 0.76
RAB28P51157 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.81■□□□□ 0.76
RAB28P51157 AL589743.5-201ENST00000616611 1050 ntBASIC19.81■□□□□ 0.76
RAB28P51157 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RAB28P51157 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.81■□□□□ 0.76
RAB28P51157 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB28P51157 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB28P51157 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.81■□□□□ 0.76
RAB28P51157 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.81■□□□□ 0.76
RAB28P51157 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB28P51157 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RAB28P51157 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB28P51157 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB28P51157 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB28P51157 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB28P51157 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.81■□□□□ 0.76
RAB28P51157 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
RAB28P51157 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB28P51157 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB28P51157 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
RAB28P51157 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB28P51157 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB28P51157 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB28P51157 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB28P51157 AL355802.2-201ENST00000402069 882 ntBASIC19.8■□□□□ 0.76
RAB28P51157 LSM12P1-201ENST00000411836 588 ntBASIC19.8■□□□□ 0.76
RAB28P51157 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms