Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CPT1AP50416 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.87■■□□□ 1.25
CPT1AP50416 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CPT1AP50416 GUSBP5-202ENST00000510805 1989 ntBASIC22.87■■□□□ 1.25
CPT1AP50416 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CPT1AP50416 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CPT1AP50416 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CPT1AP50416 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CPT1AP50416 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CPT1AP50416 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.86■■□□□ 1.25
CPT1AP50416 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
CPT1AP50416 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CPT1AP50416 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CPT1AP50416 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.86■■□□□ 1.25
CPT1AP50416 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CPT1AP50416 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CPT1AP50416 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.86■■□□□ 1.25
CPT1AP50416 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CPT1AP50416 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.86■■□□□ 1.25
CPT1AP50416 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.86■■□□□ 1.25
CPT1AP50416 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.86■■□□□ 1.25
CPT1AP50416 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
CPT1AP50416 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CPT1AP50416 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.85■■□□□ 1.25
CPT1AP50416 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.85■■□□□ 1.25
CPT1AP50416 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
CPT1AP50416 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.85■■□□□ 1.25
CPT1AP50416 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CPT1AP50416 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CPT1AP50416 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CPT1AP50416 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.85■■□□□ 1.25
CPT1AP50416 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CPT1AP50416 AL390719.1-204ENST00000412397 1219 ntBASIC22.85■■□□□ 1.25
CPT1AP50416 AC012618.2-201ENST00000428058 849 ntBASIC22.85■■□□□ 1.25
CPT1AP50416 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.85■■□□□ 1.25
CPT1AP50416 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
CPT1AP50416 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.85■■□□□ 1.25
CPT1AP50416 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.85■■□□□ 1.25
CPT1AP50416 AC073912.3-201ENST00000624414 853 ntBASIC22.85■■□□□ 1.25
CPT1AP50416 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CPT1AP50416 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CPT1AP50416 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CPT1AP50416 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CPT1AP50416 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.84■■□□□ 1.25
CPT1AP50416 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CPT1AP50416 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CPT1AP50416 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CPT1AP50416 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CPT1AP50416 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CPT1AP50416 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CPT1AP50416 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CPT1AP50416 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CPT1AP50416 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CPT1AP50416 AC239809.2-201ENST00000415381 517 ntBASIC22.84■■□□□ 1.25
CPT1AP50416 AC133681.1-201ENST00000465482 601 ntBASIC22.84■■□□□ 1.25
CPT1AP50416 AC124016.1-201ENST00000609552 612 ntBASIC22.84■■□□□ 1.25
CPT1AP50416 AC006557.6-201ENST00000623071 864 ntBASIC22.84■■□□□ 1.25
CPT1AP50416 AL023875.1-201ENST00000640777 796 ntBASIC22.84■■□□□ 1.25
CPT1AP50416 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.84■■□□□ 1.25
CPT1AP50416 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CPT1AP50416 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CPT1AP50416 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
CPT1AP50416 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.83■■□□□ 1.25
CPT1AP50416 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CPT1AP50416 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.83■■□□□ 1.25
CPT1AP50416 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.83■■□□□ 1.25
CPT1AP50416 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CPT1AP50416 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CPT1AP50416 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CPT1AP50416 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CPT1AP50416 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CPT1AP50416 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.83■■□□□ 1.25
CPT1AP50416 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.83■■□□□ 1.25
CPT1AP50416 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CPT1AP50416 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
CPT1AP50416 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
CPT1AP50416 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CPT1AP50416 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
CPT1AP50416 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.83■■□□□ 1.24
CPT1AP50416 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CPT1AP50416 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CPT1AP50416 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CPT1AP50416 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CPT1AP50416 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CPT1AP50416 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CPT1AP50416 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.82■■□□□ 1.24
CPT1AP50416 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CPT1AP50416 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
CPT1AP50416 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.82■■□□□ 1.24
CPT1AP50416 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.82■■□□□ 1.24
CPT1AP50416 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.82■■□□□ 1.24
CPT1AP50416 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CPT1AP50416 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.82■■□□□ 1.24
CPT1AP50416 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CPT1AP50416 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
CPT1AP50416 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.82■■□□□ 1.24
CPT1AP50416 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.82■■□□□ 1.24
CPT1AP50416 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.82■■□□□ 1.24
CPT1AP50416 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
CPT1AP50416 AC233702.5-201ENST00000584107 538 ntBASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms