Protein–RNA interactions for Protein: P49792

RANBP2, E3 SUMO-protein ligase RanBP2, humanhuman

Known RBP Predictions only

Length 3,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP2P49792 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.4■■□□□ 1.18
RANBP2P49792 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RANBP2P49792 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.39■■□□□ 1.18
RANBP2P49792 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.39■■□□□ 1.18
RANBP2P49792 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RANBP2P49792 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
RANBP2P49792 AC092053.2-201ENST00000640557 1818 ntBASIC22.39■■□□□ 1.17
RANBP2P49792 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
RANBP2P49792 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
RANBP2P49792 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
RANBP2P49792 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC22.39■■□□□ 1.17
RANBP2P49792 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.39■■□□□ 1.17
RANBP2P49792 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RANBP2P49792 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RANBP2P49792 AC124283.5-201ENST00000624661 1809 ntBASIC22.39■■□□□ 1.17
RANBP2P49792 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RANBP2P49792 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
RANBP2P49792 MIR1238-201ENST00000408483 83 ntBASIC22.38■■□□□ 1.17
RANBP2P49792 AL353807.1-201ENST00000427475 662 ntBASIC22.38■■□□□ 1.17
RANBP2P49792 AP000347.1-202ENST00000435868 847 ntBASIC22.38■■□□□ 1.17
RANBP2P49792 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RANBP2P49792 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RANBP2P49792 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
RANBP2P49792 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RANBP2P49792 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
RANBP2P49792 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
RANBP2P49792 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RANBP2P49792 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RANBP2P49792 AL031133.1-201ENST00000406807 723 ntBASIC22.38■■□□□ 1.17
RANBP2P49792 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.38■■□□□ 1.17
RANBP2P49792 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.38■■□□□ 1.17
RANBP2P49792 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC22.38■■□□□ 1.17
RANBP2P49792 AP000550.4-202ENST00000639755 178 ntBASIC22.38■■□□□ 1.17
RANBP2P49792 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RANBP2P49792 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
RANBP2P49792 FITM1-202ENST00000559294 800 ntBASIC22.38■■□□□ 1.17
RANBP2P49792 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22.38■■□□□ 1.17
RANBP2P49792 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
RANBP2P49792 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.37■■□□□ 1.17
RANBP2P49792 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RANBP2P49792 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RANBP2P49792 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RANBP2P49792 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RANBP2P49792 AC079089.2-201ENST00000531211 1277 ntBASIC22.37■■□□□ 1.17
RANBP2P49792 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RANBP2P49792 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
RANBP2P49792 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RANBP2P49792 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
RANBP2P49792 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.37■■□□□ 1.17
RANBP2P49792 AC022616.7-201ENST00000525383 220 ntBASIC22.37■■□□□ 1.17
RANBP2P49792 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.37■■□□□ 1.17
RANBP2P49792 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.37■■□□□ 1.17
RANBP2P49792 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RANBP2P49792 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RANBP2P49792 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RANBP2P49792 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.37■■□□□ 1.17
RANBP2P49792 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC22.36■■□□□ 1.17
RANBP2P49792 AC023511.2-201ENST00000618803 211 ntBASIC22.36■■□□□ 1.17
RANBP2P49792 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RANBP2P49792 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
RANBP2P49792 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.36■■□□□ 1.17
RANBP2P49792 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
RANBP2P49792 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.36■■□□□ 1.17
RANBP2P49792 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC22.36■■□□□ 1.17
RANBP2P49792 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC22.36■■□□□ 1.17
RANBP2P49792 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.36■■□□□ 1.17
RANBP2P49792 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.36■■□□□ 1.17
RANBP2P49792 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.36■■□□□ 1.17
RANBP2P49792 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RANBP2P49792 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RANBP2P49792 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.35■■□□□ 1.17
RANBP2P49792 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC22.35■■□□□ 1.17
RANBP2P49792 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RANBP2P49792 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RANBP2P49792 AC063952.2-201ENST00000498792 1227 ntBASIC22.35■■□□□ 1.17
RANBP2P49792 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RANBP2P49792 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC22.35■■□□□ 1.17
RANBP2P49792 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
RANBP2P49792 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.35■■□□□ 1.17
RANBP2P49792 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.35■■□□□ 1.17
RANBP2P49792 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.35■■□□□ 1.17
RANBP2P49792 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RANBP2P49792 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RANBP2P49792 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RANBP2P49792 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.35■■□□□ 1.17
RANBP2P49792 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.35■■□□□ 1.17
RANBP2P49792 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC22.35■■□□□ 1.17
RANBP2P49792 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RANBP2P49792 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RANBP2P49792 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
RANBP2P49792 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RANBP2P49792 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.34■■□□□ 1.17
RANBP2P49792 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.34■■□□□ 1.17
RANBP2P49792 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RANBP2P49792 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
RANBP2P49792 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RANBP2P49792 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RANBP2P49792 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC22.34■■□□□ 1.17
RANBP2P49792 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RANBP2P49792 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms