Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.17■□□□□ 0.18
CDC34P49427 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.17■□□□□ 0.18
CDC34P49427 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDC34P49427 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC34P49427 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC34P49427 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDC34P49427 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC34P49427 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDC34P49427 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC34P49427 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDC34P49427 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.16■□□□□ 0.18
CDC34P49427 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.16■□□□□ 0.18
CDC34P49427 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC34P49427 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC34P49427 TCF3P1-201ENST00000423021 1937 ntBASIC16.16■□□□□ 0.18
CDC34P49427 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC34P49427 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDC34P49427 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC34P49427 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDC34P49427 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC34P49427 AC099791.2-201ENST00000605725 427 ntBASIC16.16■□□□□ 0.18
CDC34P49427 MIR4787-201ENST00000607364 84 ntBASIC16.16■□□□□ 0.18
CDC34P49427 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC34P49427 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDC34P49427 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC34P49427 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDC34P49427 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC34P49427 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDC34P49427 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDC34P49427 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC34P49427 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC34P49427 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.15■□□□□ 0.18
CDC34P49427 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC34P49427 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CDC34P49427 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDC34P49427 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.15■□□□□ 0.18
CDC34P49427 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC34P49427 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC34P49427 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC34P49427 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.15■□□□□ 0.18
CDC34P49427 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CDC34P49427 TSPY9P-201ENST00000440215 945 ntBASIC16.15■□□□□ 0.18
CDC34P49427 TSPY11P-201ENST00000442607 1045 ntBASIC16.15■□□□□ 0.18
CDC34P49427 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDC34P49427 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CDC34P49427 MIR3181-201ENST00000578512 73 ntBASIC16.15■□□□□ 0.18
CDC34P49427 AC010525.1-201ENST00000585559 441 ntBASIC16.15■□□□□ 0.18
CDC34P49427 AC012354.3-201ENST00000623734 483 ntBASIC16.15■□□□□ 0.18
CDC34P49427 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC34P49427 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC34P49427 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC34P49427 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC34P49427 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC34P49427 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.15■□□□□ 0.18
CDC34P49427 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CDC34P49427 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDC34P49427 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC34P49427 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.14■□□□□ 0.17
CDC34P49427 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.14■□□□□ 0.17
CDC34P49427 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDC34P49427 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDC34P49427 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC34P49427 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC34P49427 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDC34P49427 AC098818.2-201ENST00000564925 2320 ntBASIC16.14■□□□□ 0.17
CDC34P49427 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDC34P49427 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDC34P49427 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC34P49427 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CDC34P49427 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC34P49427 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms