Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC9A3P48764 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC9A3P48764 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC9A3P48764 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC9A3P48764 AP005212.1-201ENST00000581547 1997 ntBASIC18.74■□□□□ 0.59
SLC9A3P48764 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC9A3P48764 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.74■□□□□ 0.59
SLC9A3P48764 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC9A3P48764 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC9A3P48764 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC9A3P48764 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.74■□□□□ 0.59
SLC9A3P48764 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC9A3P48764 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC9A3P48764 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC9A3P48764 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC9A3P48764 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC9A3P48764 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SLC9A3P48764 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC9A3P48764 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC9A3P48764 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC9A3P48764 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC9A3P48764 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC9A3P48764 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC9A3P48764 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SLC9A3P48764 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC9A3P48764 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC9A3P48764 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC9A3P48764 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC9A3P48764 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC9A3P48764 AC073314.1-201ENST00000568729 2216 ntBASIC18.73■□□□□ 0.59
SLC9A3P48764 IRS3P-201ENST00000223076 1006 ntBASIC18.73■□□□□ 0.59
SLC9A3P48764 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC9A3P48764 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC9A3P48764 MIR6084-201ENST00000622012 110 ntBASIC18.73■□□□□ 0.59
SLC9A3P48764 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC9A3P48764 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SLC9A3P48764 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC9A3P48764 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC9A3P48764 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC9A3P48764 AC011484.1-201ENST00000377652 1995 ntBASIC18.73■□□□□ 0.59
SLC9A3P48764 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC9A3P48764 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC9A3P48764 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC9A3P48764 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC9A3P48764 AC007225.1-201ENST00000566331 1836 ntBASIC18.72■□□□□ 0.59
SLC9A3P48764 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SLC9A3P48764 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
SLC9A3P48764 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SLC9A3P48764 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC9A3P48764 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC9A3P48764 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC9A3P48764 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC9A3P48764 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC9A3P48764 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC9A3P48764 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC9A3P48764 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC9A3P48764 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC9A3P48764 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC9A3P48764 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC9A3P48764 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC9A3P48764 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLC9A3P48764 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC9A3P48764 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC9A3P48764 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC9A3P48764 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SLC9A3P48764 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC9A3P48764 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC9A3P48764 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SLC9A3P48764 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLC9A3P48764 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC9A3P48764 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC9A3P48764 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC9A3P48764 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC9A3P48764 AC027612.3-201ENST00000413684 1047 ntBASIC18.71■□□□□ 0.59
SLC9A3P48764 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC9A3P48764 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC9A3P48764 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
SLC9A3P48764 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC9A3P48764 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC9A3P48764 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC9A3P48764 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC9A3P48764 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC9A3P48764 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC9A3P48764 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC9A3P48764 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SLC9A3P48764 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SLC9A3P48764 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC9A3P48764 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SLC9A3P48764 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC9A3P48764 KRT16P2-201ENST00000414673 1423 ntBASIC18.7■□□□□ 0.58
SLC9A3P48764 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC9A3P48764 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC9A3P48764 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC9A3P48764 AC138907.5-202ENST00000569484 235 ntBASIC18.7■□□□□ 0.58
SLC9A3P48764 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SLC9A3P48764 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC9A3P48764 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC9A3P48764 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SLC9A3P48764 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SLC9A3P48764 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms