Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 SMT3YDR510W 306 nt3.75□□□□□ -1.81
VPS53P47061 IRC4YDR540C 540 nt3.75□□□□□ -1.81
VPS53P47061 HMF1YER057C 390 nt3.75□□□□□ -1.81
VPS53P47061 YFL063WYFL063W 456 nt3.75□□□□□ -1.81
VPS53P47061 RPL37AYLR185W 267 nt3.75□□□□□ -1.81
VPS53P47061 RRP5YMR229C 5190 nt3.75□□□□□ -1.81
VPS53P47061 YBP1YBR216C 2025 nt3.75□□□□□ -1.81
VPS53P47061 YFR056CYFR056C 369 nt3.74□□□□□ -1.81
VPS53P47061 BAT1YHR208W 1182 nt3.74□□□□□ -1.81
VPS53P47061 PAU14YIL176C 363 nt3.74□□□□□ -1.81
VPS53P47061 PAU1YJL223C 363 nt3.74□□□□□ -1.81
VPS53P47061 YJR140W-AYJR140W-A 150 nt3.74□□□□□ -1.81
VPS53P47061 YKL111CYKL111C 336 nt3.74□□□□□ -1.81
VPS53P47061 SHH3YMR118C 591 nt3.74□□□□□ -1.81
VPS53P47061 EGD1YPL037C 474 nt3.74□□□□□ -1.81
VPS53P47061 YSW1YBR148W 1830 nt3.74□□□□□ -1.81
VPS53P47061 SHQ1YIL104C 1524 nt3.74□□□□□ -1.81
VPS53P47061 SMC3YJL074C 3693 nt3.74□□□□□ -1.81
VPS53P47061 RED1YLR263W 2484 nt3.73□□□□□ -1.81
VPS53P47061 tF(GAA)DtF(GAA)D 73 nt3.73□□□□□ -1.81
VPS53P47061 tF(GAA)NtF(GAA)N 73 nt3.73□□□□□ -1.81
VPS53P47061 CYC7YEL039C 342 nt3.73□□□□□ -1.81
VPS53P47061 BLI1YKL061W 342 nt3.73□□□□□ -1.81
VPS53P47061 SRL3YKR091W 741 nt3.73□□□□□ -1.81
VPS53P47061 NOT5YPR072W 1683 nt3.73□□□□□ -1.81
VPS53P47061 NUP60YAR002W 1620 nt3.73□□□□□ -1.81
VPS53P47061 ARG2YJL071W 1725 nt3.73□□□□□ -1.81
VPS53P47061 JJJ2YJL162C 1752 nt3.72□□□□□ -1.81
VPS53P47061 SLP1YOR154W 1764 nt3.72□□□□□ -1.81
VPS53P47061 snR80snR80 171 nt3.72□□□□□ -1.81
VPS53P47061 AIM11YER093C-A 414 nt3.72□□□□□ -1.81
VPS53P47061 URM1YIL008W 300 nt3.72□□□□□ -1.81
VPS53P47061 YNL198CYNL198C 303 nt3.72□□□□□ -1.81
VPS53P47061 IRC23YOR044W 474 nt3.72□□□□□ -1.81
VPS53P47061 MUS81YDR386W 1899 nt3.72□□□□□ -1.81
VPS53P47061 NSP1YJL041W 2472 nt3.72□□□□□ -1.81
VPS53P47061 RPA190YOR341W 4995 nt3.72□□□□□ -1.81
VPS53P47061 CCM1YGR150C 2595 nt3.72□□□□□ -1.81
VPS53P47061 Q0092Q0092 141 nt3.71□□□□□ -1.82
VPS53P47061 LSM1YJL124C 519 nt3.71□□□□□ -1.82
VPS53P47061 YBL073WYBL073W 312 nt3.71□□□□□ -1.82
VPS53P47061 TMA108YIL137C 2841 nt3.71□□□□□ -1.82
VPS53P47061 MSR1YHR091C 1932 nt3.71□□□□□ -1.82
VPS53P47061 ATP22YDR350C 2055 nt3.71□□□□□ -1.82
VPS53P47061 YGR265WYGR265W 411 nt3.7□□□□□ -1.82
VPS53P47061 COX23YHR116W 456 nt3.7□□□□□ -1.82
VPS53P47061 YHR214C-EYHR214C-E 300 nt3.7□□□□□ -1.82
VPS53P47061 YAR070CYAR070C 300 nt3.7□□□□□ -1.82
VPS53P47061 YLR416CYLR416C 399 nt3.7□□□□□ -1.82
VPS53P47061 HHF1YBR009C 312 nt3.7□□□□□ -1.82
VPS53P47061 YPL229WYPL229W 621 nt3.7□□□□□ -1.82
VPS53P47061 YPR099CYPR099C 357 nt3.7□□□□□ -1.82
VPS53P47061 SNT1YCR033W 3681 nt3.7□□□□□ -1.82
VPS53P47061 DNM1YLL001W 2274 nt3.69□□□□□ -1.82
VPS53P47061 PEX11YOL147C 711 nt3.69□□□□□ -1.82
VPS53P47061 YPR108W-AYPR108W-A 213 nt3.69□□□□□ -1.82
VPS53P47061 ATP25YMR098C 1839 nt3.69□□□□□ -1.82
VPS53P47061 SNF12YNR023W 1701 nt3.69□□□□□ -1.82
VPS53P47061 PHO81YGR233C 3537 nt3.69□□□□□ -1.82
VPS53P47061 LYS9YNR050C 1341 nt3.69□□□□□ -1.82
VPS53P47061 MBB1YJL199C 327 nt3.68□□□□□ -1.82
VPS53P47061 RPS22BYLR367W 393 nt3.68□□□□□ -1.82
VPS53P47061 HEM4YOR278W 828 nt3.68□□□□□ -1.82
VPS53P47061 HEF3YNL014W 3135 nt3.67□□□□□ -1.82
VPS53P47061 RAD5YLR032W 3510 nt3.67□□□□□ -1.82
VPS53P47061 VHR2YER064C 1518 nt3.67□□□□□ -1.82
VPS53P47061 YPR077CYPR077C 372 nt3.67□□□□□ -1.82
VPS53P47061 snR42snR42 351 nt3.67□□□□□ -1.82
VPS53P47061 BYE1YKL005C 1785 nt3.66□□□□□ -1.82
VPS53P47061 YHR078WYHR078W 1659 nt3.66□□□□□ -1.82
VPS53P47061 YDR169C-AYDR169C-A 150 nt3.66□□□□□ -1.82
VPS53P47061 TIF35YDR429C 825 nt3.66□□□□□ -1.82
VPS53P47061 RPL30YGL030W 318 nt3.66□□□□□ -1.82
VPS53P47061 MRP8YKL142W 660 nt3.66□□□□□ -1.82
VPS53P47061 RPL9BYNL067W 576 nt3.66□□□□□ -1.82
VPS53P47061 RPS8AYBL072C 603 nt3.66□□□□□ -1.82
VPS53P47061 RPA135YPR010C 3612 nt3.66□□□□□ -1.82
VPS53P47061 FAA2YER015W 2235 nt3.66□□□□□ -1.82
VPS53P47061 YDL176WYDL176W 2127 nt3.65□□□□□ -1.82
VPS53P47061 PWP2YCR057C 2772 nt3.65□□□□□ -1.82
VPS53P47061 YER079C-AYER079C-A 339 nt3.65□□□□□ -1.83
VPS53P47061 YLR012CYLR012C 300 nt3.65□□□□□ -1.83
VPS53P47061 YMR046W-AYMR046W-A 129 nt3.65□□□□□ -1.83
VPS53P47061 YBR085C-AYBR085C-A 258 nt3.65□□□□□ -1.83
VPS53P47061 snR51snR51 107 nt3.65□□□□□ -1.83
VPS53P47061 SPP382YLR424W 2127 nt3.65□□□□□ -1.83
VPS53P47061 IRC10YOL015W 1761 nt3.64□□□□□ -1.83
VPS53P47061 TRZ1YKR079C 2517 nt3.64□□□□□ -1.83
VPS53P47061 HPA3YEL066W 540 nt3.64□□□□□ -1.83
VPS53P47061 RPB9YGL070C 369 nt3.64□□□□□ -1.83
VPS53P47061 YGL188C-AYGL188C-A 141 nt3.64□□□□□ -1.83
VPS53P47061 HYR1YIR037W 492 nt3.64□□□□□ -1.83
VPS53P47061 ISU1YPL135W 498 nt3.64□□□□□ -1.83
VPS53P47061 YPR053CYPR053C 456 nt3.64□□□□□ -1.83
VPS53P47061 YGR237CYGR237C 2358 nt3.64□□□□□ -1.83
VPS53P47061 ZDS2YML109W 2829 nt3.64□□□□□ -1.83
VPS53P47061 CIN1YOR349W 3045 nt3.63□□□□□ -1.83
VPS53P47061 TSA2YDR453C 591 nt3.63□□□□□ -1.83
VPS53P47061 tT(UGU)Q1tT(UGU)Q1 76 nt3.63□□□□□ -1.83
VPS53P47061 TIM8YJR135W-A 264 nt3.63□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms