Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SLC1A3P43003 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A3P43003 AP005212.1-201ENST00000581547 1997 ntBASIC18.84■□□□□ 0.61
SLC1A3P43003 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SLC1A3P43003 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A3P43003 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A3P43003 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC1A3P43003 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC1A3P43003 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC1A3P43003 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC1A3P43003 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC1A3P43003 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC1A3P43003 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC1A3P43003 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC1A3P43003 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC1A3P43003 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
SLC1A3P43003 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC1A3P43003 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC1A3P43003 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC1A3P43003 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC1A3P43003 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC1A3P43003 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC1A3P43003 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC1A3P43003 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC1A3P43003 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC1A3P43003 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC1A3P43003 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC1A3P43003 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC1A3P43003 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
SLC1A3P43003 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
SLC1A3P43003 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A3P43003 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
SLC1A3P43003 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC1A3P43003 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A3P43003 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC1A3P43003 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A3P43003 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A3P43003 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC1A3P43003 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC1A3P43003 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC1A3P43003 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC1A3P43003 AC243732.1-201ENST00000612648 864 ntBASIC18.82■□□□□ 0.6
SLC1A3P43003 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.82■□□□□ 0.6
SLC1A3P43003 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC1A3P43003 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A3P43003 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A3P43003 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A3P43003 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A3P43003 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC1A3P43003 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SLC1A3P43003 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A3P43003 KRT18P5-201ENST00000436075 1291 ntBASIC18.81■□□□□ 0.6
SLC1A3P43003 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A3P43003 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.81■□□□□ 0.6
SLC1A3P43003 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.81■□□□□ 0.6
SLC1A3P43003 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.81■□□□□ 0.6
SLC1A3P43003 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.81■□□□□ 0.6
SLC1A3P43003 UBE2DNL-204ENST00000602536 740 ntBASIC18.81■□□□□ 0.6
SLC1A3P43003 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.81■□□□□ 0.6
SLC1A3P43003 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A3P43003 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC1A3P43003 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A3P43003 AC073314.1-201ENST00000568729 2216 ntBASIC18.81■□□□□ 0.6
SLC1A3P43003 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A3P43003 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A3P43003 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A3P43003 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A3P43003 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A3P43003 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A3P43003 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A3P43003 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SLC1A3P43003 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC1A3P43003 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A3P43003 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
SLC1A3P43003 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC1A3P43003 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC1A3P43003 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC1A3P43003 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC1A3P43003 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A3P43003 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC1A3P43003 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC1A3P43003 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
SLC1A3P43003 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A3P43003 RBM17P2-201ENST00000616397 1405 ntBASIC18.8■□□□□ 0.6
SLC1A3P43003 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SLC1A3P43003 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC1A3P43003 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A3P43003 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC1A3P43003 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A3P43003 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC1A3P43003 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A3P43003 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC1A3P43003 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A3P43003 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A3P43003 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A3P43003 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A3P43003 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A3P43003 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A3P43003 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SLC1A3P43003 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms