Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.19■■□□□ 1.3
PRPHP41219 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRPHP41219 AC231657.2-201ENST00000624556 255 ntBASIC23.19■■□□□ 1.3
PRPHP41219 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.19■■□□□ 1.3
PRPHP41219 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
PRPHP41219 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
PRPHP41219 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRPHP41219 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PRPHP41219 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.19■■□□□ 1.3
PRPHP41219 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRPHP41219 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRPHP41219 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRPHP41219 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPHP41219 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.18■■□□□ 1.3
PRPHP41219 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PRPHP41219 AC068338.2-201ENST00000563278 1430 ntBASIC23.18■■□□□ 1.3
PRPHP41219 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
PRPHP41219 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRPHP41219 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPHP41219 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.18■■□□□ 1.3
PRPHP41219 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PRPHP41219 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPHP41219 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRPHP41219 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.18■■□□□ 1.3
PRPHP41219 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.18■■□□□ 1.3
PRPHP41219 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.18■■□□□ 1.3
PRPHP41219 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.18■■□□□ 1.3
PRPHP41219 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.18■■□□□ 1.3
PRPHP41219 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.18■■□□□ 1.3
PRPHP41219 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.18■■□□□ 1.3
PRPHP41219 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPHP41219 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.18■■□□□ 1.3
PRPHP41219 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.18■■□□□ 1.3
PRPHP41219 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRPHP41219 AP005212.1-201ENST00000581547 1997 ntBASIC23.18■■□□□ 1.3
PRPHP41219 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPHP41219 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.17■■□□□ 1.3
PRPHP41219 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.17■■□□□ 1.3
PRPHP41219 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.17■■□□□ 1.3
PRPHP41219 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PRPHP41219 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PRPHP41219 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.17■■□□□ 1.3
PRPHP41219 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPHP41219 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.17■■□□□ 1.3
PRPHP41219 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPHP41219 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.17■■□□□ 1.3
PRPHP41219 AC016405.3-201ENST00000607710 860 ntBASIC23.17■■□□□ 1.3
PRPHP41219 IKBKGP1-201ENST00000612193 1073 ntBASIC23.17■■□□□ 1.3
PRPHP41219 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PRPHP41219 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
PRPHP41219 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
PRPHP41219 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPHP41219 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPHP41219 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PRPHP41219 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPHP41219 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.16■■□□□ 1.3
PRPHP41219 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPHP41219 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPHP41219 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.16■■□□□ 1.3
PRPHP41219 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPHP41219 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.16■■□□□ 1.3
PRPHP41219 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.16■■□□□ 1.3
PRPHP41219 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.16■■□□□ 1.3
PRPHP41219 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PRPHP41219 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPHP41219 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPHP41219 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPHP41219 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
PRPHP41219 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.16■■□□□ 1.3
PRPHP41219 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPHP41219 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PRPHP41219 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRPHP41219 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRPHP41219 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.15■■□□□ 1.3
PRPHP41219 AL121603.2-201ENST00000557373 2117 ntBASIC23.15■■□□□ 1.3
PRPHP41219 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.15■■□□□ 1.3
PRPHP41219 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.15■■□□□ 1.3
PRPHP41219 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRPHP41219 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRPHP41219 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PRPHP41219 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRPHP41219 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRPHP41219 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.15■■□□□ 1.3
PRPHP41219 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRPHP41219 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.15■■□□□ 1.3
PRPHP41219 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRPHP41219 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRPHP41219 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRPHP41219 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRPHP41219 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.15■■□□□ 1.3
PRPHP41219 GABARAPL3-202ENST00000624044 1851 ntBASIC23.15■■□□□ 1.3
PRPHP41219 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PRPHP41219 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRPHP41219 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRPHP41219 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.15■■□□□ 1.3
PRPHP41219 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRPHP41219 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PRPHP41219 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
PRPHP41219 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PRPHP41219 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms