Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MDH1P40925 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MDH1P40925 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.62■□□□□ 0.89
MDH1P40925 pRNA.6-201ENST00000610482 90 ntBASIC20.62■□□□□ 0.89
MDH1P40925 pRNA.5-201ENST00000612139 90 ntBASIC20.62■□□□□ 0.89
MDH1P40925 pRNA.11-201ENST00000618423 90 ntBASIC20.62■□□□□ 0.89
MDH1P40925 pRNA.13-201ENST00000619112 90 ntBASIC20.62■□□□□ 0.89
MDH1P40925 AC241377.3-202ENST00000626088 1088 ntBASIC20.62■□□□□ 0.89
MDH1P40925 AC241585.3-202ENST00000628937 1088 ntBASIC20.62■□□□□ 0.89
MDH1P40925 AC245100.8-202ENST00000629247 1058 ntBASIC20.62■□□□□ 0.89
MDH1P40925 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MDH1P40925 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
MDH1P40925 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
MDH1P40925 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.62■□□□□ 0.89
MDH1P40925 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MDH1P40925 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MDH1P40925 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
MDH1P40925 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.61■□□□□ 0.89
MDH1P40925 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MDH1P40925 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MDH1P40925 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MDH1P40925 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.61■□□□□ 0.89
MDH1P40925 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
MDH1P40925 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.61■□□□□ 0.89
MDH1P40925 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.61■□□□□ 0.89
MDH1P40925 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MDH1P40925 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MDH1P40925 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.61■□□□□ 0.89
MDH1P40925 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.61■□□□□ 0.89
MDH1P40925 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.61■□□□□ 0.89
MDH1P40925 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.61■□□□□ 0.89
MDH1P40925 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.61■□□□□ 0.89
MDH1P40925 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.61■□□□□ 0.89
MDH1P40925 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MDH1P40925 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MDH1P40925 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MDH1P40925 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MDH1P40925 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MDH1P40925 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MDH1P40925 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MDH1P40925 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
MDH1P40925 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.6■□□□□ 0.89
MDH1P40925 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MDH1P40925 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MDH1P40925 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MDH1P40925 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MDH1P40925 OR2I1P-207ENST00000453522 948 ntBASIC20.6■□□□□ 0.89
MDH1P40925 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
MDH1P40925 AC103724.3-201ENST00000564481 992 ntBASIC20.6■□□□□ 0.89
MDH1P40925 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MDH1P40925 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MDH1P40925 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.6■□□□□ 0.89
MDH1P40925 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MDH1P40925 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MDH1P40925 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MDH1P40925 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MDH1P40925 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.6■□□□□ 0.89
MDH1P40925 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MDH1P40925 AC011484.1-201ENST00000377652 1995 ntBASIC20.59■□□□□ 0.89
MDH1P40925 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MDH1P40925 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MDH1P40925 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
MDH1P40925 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.59■□□□□ 0.89
MDH1P40925 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.59■□□□□ 0.89
MDH1P40925 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.59■□□□□ 0.89
MDH1P40925 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MDH1P40925 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
MDH1P40925 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MDH1P40925 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MDH1P40925 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MDH1P40925 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MDH1P40925 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MDH1P40925 AC093484.2-201ENST00000580996 2166 ntBASIC20.58■□□□□ 0.89
MDH1P40925 AC103834.1-201ENST00000520383 144 ntBASIC20.58■□□□□ 0.89
MDH1P40925 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MDH1P40925 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
MDH1P40925 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.88
MDH1P40925 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.58■□□□□ 0.88
MDH1P40925 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
MDH1P40925 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.58■□□□□ 0.88
MDH1P40925 BX005040.4-201ENST00000637145 1518 ntBASIC20.58■□□□□ 0.88
MDH1P40925 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MDH1P40925 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
MDH1P40925 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
MDH1P40925 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.57■□□□□ 0.88
MDH1P40925 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
MDH1P40925 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
MDH1P40925 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MDH1P40925 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.57■□□□□ 0.88
MDH1P40925 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MDH1P40925 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
MDH1P40925 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.57■□□□□ 0.88
MDH1P40925 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.57■□□□□ 0.88
MDH1P40925 AC005082.1-201ENST00000413042 2259 ntBASIC20.57■□□□□ 0.88
MDH1P40925 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.57■□□□□ 0.88
MDH1P40925 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MDH1P40925 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MDH1P40925 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MDH1P40925 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.56■□□□□ 0.88
MDH1P40925 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms