Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL15A1P39059 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC26.19■■□□□ 1.78
COL15A1P39059 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC26.19■■□□□ 1.78
COL15A1P39059 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL15A1P39059 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL15A1P39059 SERF2-207ENST00000409614 582 ntTSL 2 BASIC26.19■■□□□ 1.78
COL15A1P39059 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL15A1P39059 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL15A1P39059 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC26.19■■□□□ 1.78
COL15A1P39059 REXO2-216ENST00000544196 452 ntTSL 3 BASIC26.19■■□□□ 1.78
COL15A1P39059 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL15A1P39059 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL15A1P39059 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL15A1P39059 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.18■■□□□ 1.78
COL15A1P39059 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL15A1P39059 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL15A1P39059 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL15A1P39059 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
COL15A1P39059 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
COL15A1P39059 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
COL15A1P39059 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.18■■□□□ 1.78
COL15A1P39059 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC26.18■■□□□ 1.78
COL15A1P39059 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL15A1P39059 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC26.18■■□□□ 1.78
COL15A1P39059 MTDHP1-201ENST00000605323 784 ntBASIC26.18■■□□□ 1.78
COL15A1P39059 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.18■■□□□ 1.78
COL15A1P39059 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL15A1P39059 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL15A1P39059 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
COL15A1P39059 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.17■■□□□ 1.78
COL15A1P39059 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL15A1P39059 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL15A1P39059 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC26.17■■□□□ 1.78
COL15A1P39059 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
COL15A1P39059 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL15A1P39059 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL15A1P39059 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL15A1P39059 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL15A1P39059 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
COL15A1P39059 AC233702.5-201ENST00000584107 538 ntBASIC26.17■■□□□ 1.78
COL15A1P39059 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.17■■□□□ 1.78
COL15A1P39059 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.17■■□□□ 1.78
COL15A1P39059 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.17■■□□□ 1.78
COL15A1P39059 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL15A1P39059 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL15A1P39059 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL15A1P39059 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
COL15A1P39059 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.16■■□□□ 1.78
COL15A1P39059 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL15A1P39059 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL15A1P39059 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL15A1P39059 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL15A1P39059 AC124016.1-201ENST00000609552 612 ntBASIC26.16■■□□□ 1.78
COL15A1P39059 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
COL15A1P39059 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
COL15A1P39059 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL15A1P39059 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL15A1P39059 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.16■■□□□ 1.78
COL15A1P39059 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
COL15A1P39059 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL15A1P39059 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
COL15A1P39059 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
COL15A1P39059 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
COL15A1P39059 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL15A1P39059 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC26.15■■□□□ 1.78
COL15A1P39059 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL15A1P39059 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
COL15A1P39059 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
COL15A1P39059 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL15A1P39059 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.15■■□□□ 1.78
COL15A1P39059 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.15■■□□□ 1.78
COL15A1P39059 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC26.14■■□□□ 1.78
COL15A1P39059 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.14■■□□□ 1.78
COL15A1P39059 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL15A1P39059 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC26.14■■□□□ 1.78
COL15A1P39059 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
COL15A1P39059 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
COL15A1P39059 GGT1-206ENST00000404223 952 ntTSL 2 BASIC26.14■■□□□ 1.78
COL15A1P39059 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL15A1P39059 LY6E-205ENST00000519611 635 ntTSL 3 BASIC26.14■■□□□ 1.78
COL15A1P39059 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.78
COL15A1P39059 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL15A1P39059 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL15A1P39059 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL15A1P39059 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.14■■□□□ 1.77
COL15A1P39059 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.14■■□□□ 1.77
COL15A1P39059 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
COL15A1P39059 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC26.13■■□□□ 1.77
COL15A1P39059 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC26.13■■□□□ 1.77
COL15A1P39059 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC26.13■■□□□ 1.77
COL15A1P39059 EP400NL-214ENST00000641289 2402 ntBASIC26.13■■□□□ 1.77
COL15A1P39059 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL15A1P39059 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL15A1P39059 RPS2P55-201ENST00000397318 883 ntBASIC26.13■■□□□ 1.77
COL15A1P39059 AC133681.1-201ENST00000465482 601 ntBASIC26.13■■□□□ 1.77
COL15A1P39059 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL15A1P39059 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.13■■□□□ 1.77
COL15A1P39059 AC107956.1-201ENST00000494359 873 ntBASIC26.13■■□□□ 1.77
COL15A1P39059 RPS20-210ENST00000523936 899 ntTSL 2 BASIC26.13■■□□□ 1.77
COL15A1P39059 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms