Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CKS2P33552 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS2P33552 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.09■□□□□ 0.01
CKS2P33552 YBX1P4-201ENST00000392794 808 ntBASIC15.09■□□□□ 0.01
CKS2P33552 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CKS2P33552 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.09■□□□□ 0.01
CKS2P33552 AC004987.1-201ENST00000428627 508 ntBASIC15.09■□□□□ 0.01
CKS2P33552 AC010141.3-201ENST00000456659 717 ntBASIC15.09■□□□□ 0.01
CKS2P33552 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CKS2P33552 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.09■□□□□ 0.01
CKS2P33552 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS2P33552 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CKS2P33552 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS2P33552 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS2P33552 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS2P33552 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS2P33552 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.09■□□□□ 0.01
CKS2P33552 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CKS2P33552 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.09■□□□□ 0.01
CKS2P33552 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS2P33552 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.08■□□□□ 0.01
CKS2P33552 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.08■□□□□ 0.01
CKS2P33552 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CKS2P33552 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.08■□□□□ 0
CKS2P33552 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKS2P33552 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CKS2P33552 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CKS2P33552 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.08■□□□□ 0
CKS2P33552 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKS2P33552 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKS2P33552 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.08■□□□□ 0
CKS2P33552 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CKS2P33552 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.08■□□□□ 0
CKS2P33552 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.08■□□□□ 0
CKS2P33552 AC241377.3-202ENST00000626088 1088 ntBASIC15.08■□□□□ 0
CKS2P33552 AC241585.3-202ENST00000628937 1088 ntBASIC15.08■□□□□ 0
CKS2P33552 AC245100.8-202ENST00000629247 1058 ntBASIC15.08■□□□□ 0
CKS2P33552 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
CKS2P33552 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CKS2P33552 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CKS2P33552 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKS2P33552 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKS2P33552 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CKS2P33552 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKS2P33552 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.08■□□□□ 0
CKS2P33552 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKS2P33552 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CKS2P33552 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CKS2P33552 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CKS2P33552 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CKS2P33552 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.07■□□□□ 0
CKS2P33552 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.07■□□□□ 0
CKS2P33552 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
CKS2P33552 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS2P33552 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS2P33552 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS2P33552 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS2P33552 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.07■□□□□ 0
CKS2P33552 BX664725.1-201ENST00000438252 379 ntBASIC15.07■□□□□ 0
CKS2P33552 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
CKS2P33552 AC103724.3-201ENST00000564481 992 ntBASIC15.07■□□□□ 0
CKS2P33552 NTF6A-201ENST00000591175 560 ntBASIC15.07■□□□□ 0
CKS2P33552 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS2P33552 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS2P33552 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS2P33552 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CKS2P33552 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.07■□□□□ 0
CKS2P33552 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
CKS2P33552 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.07■□□□□ 0
CKS2P33552 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS2P33552 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS2P33552 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.07■□□□□ 0
CKS2P33552 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.07■□□□□ 0
CKS2P33552 AC116562.4-201ENST00000641316 2276 ntBASIC15.06■□□□□ 0
CKS2P33552 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CKS2P33552 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CKS2P33552 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CKS2P33552 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.06■□□□□ 0
CKS2P33552 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CKS2P33552 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.06■□□□□ 0
CKS2P33552 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CKS2P33552 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.06■□□□□ 0
CKS2P33552 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS2P33552 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
CKS2P33552 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.06■□□□□ 0
CKS2P33552 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms