Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN3P26045 AC016769.1-201ENST00000409132 1010 ntBASIC20.94■□□□□ 0.94
PTPN3P26045 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN3P26045 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN3P26045 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN3P26045 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.94■□□□□ 0.94
PTPN3P26045 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PTPN3P26045 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PTPN3P26045 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PTPN3P26045 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN3P26045 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPN3P26045 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PTPN3P26045 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN3P26045 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN3P26045 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
PTPN3P26045 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN3P26045 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
PTPN3P26045 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPN3P26045 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPN3P26045 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPN3P26045 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN3P26045 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPN3P26045 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PTPN3P26045 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.93■□□□□ 0.94
PTPN3P26045 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.93■□□□□ 0.94
PTPN3P26045 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN3P26045 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPN3P26045 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PTPN3P26045 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN3P26045 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PTPN3P26045 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN3P26045 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PTPN3P26045 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
PTPN3P26045 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN3P26045 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN3P26045 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PTPN3P26045 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN3P26045 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN3P26045 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PTPN3P26045 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PTPN3P26045 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN3P26045 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.92■□□□□ 0.94
PTPN3P26045 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.92■□□□□ 0.94
PTPN3P26045 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN3P26045 MIR2861-201ENST00000636310 90 ntBASIC20.92■□□□□ 0.94
PTPN3P26045 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN3P26045 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PTPN3P26045 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
PTPN3P26045 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN3P26045 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN3P26045 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PTPN3P26045 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN3P26045 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN3P26045 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PTPN3P26045 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN3P26045 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.91■□□□□ 0.94
PTPN3P26045 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN3P26045 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN3P26045 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PTPN3P26045 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
PTPN3P26045 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN3P26045 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.91■□□□□ 0.94
PTPN3P26045 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN3P26045 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN3P26045 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN3P26045 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN3P26045 CDV3P1-201ENST00000471403 739 ntBASIC20.91■□□□□ 0.94
PTPN3P26045 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN3P26045 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN3P26045 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
PTPN3P26045 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PTPN3P26045 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PTPN3P26045 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN3P26045 AC020907.5-201ENST00000624372 1936 ntBASIC20.9■□□□□ 0.94
PTPN3P26045 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN3P26045 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN3P26045 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
PTPN3P26045 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN3P26045 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN3P26045 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PTPN3P26045 MIR935-201ENST00000401179 91 ntBASIC20.9■□□□□ 0.94
PTPN3P26045 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PTPN3P26045 AC007322.4-201ENST00000509611 723 ntBASIC20.9■□□□□ 0.94
PTPN3P26045 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.9■□□□□ 0.94
PTPN3P26045 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.9■□□□□ 0.94
PTPN3P26045 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PTPN3P26045 AC011767.1-201ENST00000617410 1153 ntBASIC20.9■□□□□ 0.94
PTPN3P26045 AC013268.1-206ENST00000638368 961 ntBASIC20.9■□□□□ 0.94
PTPN3P26045 AC112229.1-201ENST00000639295 961 ntBASIC20.9■□□□□ 0.94
PTPN3P26045 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN3P26045 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN3P26045 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN3P26045 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.9■□□□□ 0.94
PTPN3P26045 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN3P26045 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN3P26045 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTPN3P26045 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTPN3P26045 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN3P26045 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN3P26045 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms