Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.66■□□□□ 0.74
PTX3P26022 TERF1P5-201ENST00000477545 1207 ntBASIC19.66■□□□□ 0.74
PTX3P26022 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PTX3P26022 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PTX3P26022 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 AC010536.3-201ENST00000620306 533 ntBASIC19.66■□□□□ 0.74
PTX3P26022 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.66■□□□□ 0.74
PTX3P26022 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.66■□□□□ 0.74
PTX3P26022 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PTX3P26022 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTX3P26022 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTX3P26022 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTX3P26022 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.65■□□□□ 0.74
PTX3P26022 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTX3P26022 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTX3P26022 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTX3P26022 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PTX3P26022 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTX3P26022 AC016769.1-201ENST00000409132 1010 ntBASIC19.65■□□□□ 0.74
PTX3P26022 AC007322.3-201ENST00000426526 701 ntBASIC19.65■□□□□ 0.74
PTX3P26022 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTX3P26022 CDV3P1-201ENST00000471403 739 ntBASIC19.65■□□□□ 0.74
PTX3P26022 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.65■□□□□ 0.74
PTX3P26022 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.65■□□□□ 0.74
PTX3P26022 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.65■□□□□ 0.74
PTX3P26022 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.65■□□□□ 0.74
PTX3P26022 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTX3P26022 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTX3P26022 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.65■□□□□ 0.74
PTX3P26022 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTX3P26022 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTX3P26022 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTX3P26022 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.64■□□□□ 0.74
PTX3P26022 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.64■□□□□ 0.73
PTX3P26022 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PTX3P26022 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTX3P26022 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTX3P26022 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.64■□□□□ 0.73
PTX3P26022 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTX3P26022 AL162430.1-201ENST00000480705 870 ntBASIC19.64■□□□□ 0.73
PTX3P26022 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.64■□□□□ 0.73
PTX3P26022 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.64■□□□□ 0.73
PTX3P26022 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PTX3P26022 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
PTX3P26022 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTX3P26022 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTX3P26022 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.64■□□□□ 0.73
PTX3P26022 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PTX3P26022 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTX3P26022 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTX3P26022 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTX3P26022 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.64■□□□□ 0.73
PTX3P26022 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTX3P26022 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PTX3P26022 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.63■□□□□ 0.73
PTX3P26022 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PTX3P26022 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PTX3P26022 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PTX3P26022 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PTX3P26022 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PTX3P26022 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.63■□□□□ 0.73
PTX3P26022 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PTX3P26022 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PTX3P26022 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.63■□□□□ 0.73
PTX3P26022 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTX3P26022 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.63■□□□□ 0.73
PTX3P26022 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PTX3P26022 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.62■□□□□ 0.73
PTX3P26022 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
PTX3P26022 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTX3P26022 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PTX3P26022 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.62■□□□□ 0.73
PTX3P26022 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTX3P26022 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTX3P26022 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.62■□□□□ 0.73
PTX3P26022 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.62■□□□□ 0.73
PTX3P26022 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTX3P26022 AL591742.1-201ENST00000604433 565 ntBASIC19.62■□□□□ 0.73
PTX3P26022 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms