Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRM3P20309 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CHRM3P20309 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.39■□□□□ 0.85
CHRM3P20309 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRM3P20309 MYCNOS-205ENST00000641950 531 ntBASIC20.39■□□□□ 0.85
CHRM3P20309 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRM3P20309 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRM3P20309 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CHRM3P20309 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CHRM3P20309 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRM3P20309 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.39■□□□□ 0.85
CHRM3P20309 AC116050.2-201ENST00000612102 1779 ntBASIC20.39■□□□□ 0.85
CHRM3P20309 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRM3P20309 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRM3P20309 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRM3P20309 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRM3P20309 RBM17P2-201ENST00000616397 1405 ntBASIC20.38■□□□□ 0.85
CHRM3P20309 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRM3P20309 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRM3P20309 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.38■□□□□ 0.85
CHRM3P20309 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.38■□□□□ 0.85
CHRM3P20309 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRM3P20309 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRM3P20309 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.38■□□□□ 0.85
CHRM3P20309 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRM3P20309 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.38■□□□□ 0.85
CHRM3P20309 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CHRM3P20309 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRM3P20309 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRM3P20309 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHRM3P20309 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRM3P20309 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRM3P20309 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHRM3P20309 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRM3P20309 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CHRM3P20309 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.37■□□□□ 0.85
CHRM3P20309 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRM3P20309 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRM3P20309 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRM3P20309 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHRM3P20309 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.37■□□□□ 0.85
CHRM3P20309 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRM3P20309 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CHRM3P20309 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.37■□□□□ 0.85
CHRM3P20309 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRM3P20309 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CHRM3P20309 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.37■□□□□ 0.85
CHRM3P20309 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRM3P20309 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.37■□□□□ 0.85
CHRM3P20309 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CHRM3P20309 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.37■□□□□ 0.85
CHRM3P20309 AC243732.1-201ENST00000612648 864 ntBASIC20.37■□□□□ 0.85
CHRM3P20309 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.37■□□□□ 0.85
CHRM3P20309 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.37■□□□□ 0.85
CHRM3P20309 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRM3P20309 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRM3P20309 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRM3P20309 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CHRM3P20309 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRM3P20309 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRM3P20309 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRM3P20309 FP700111.2-201ENST00000619190 1892 ntBASIC20.37■□□□□ 0.85
CHRM3P20309 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRM3P20309 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRM3P20309 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRM3P20309 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRM3P20309 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRM3P20309 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRM3P20309 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRM3P20309 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CHRM3P20309 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRM3P20309 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRM3P20309 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRM3P20309 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRM3P20309 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRM3P20309 AC007225.1-201ENST00000566331 1836 ntBASIC20.36■□□□□ 0.85
CHRM3P20309 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRM3P20309 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRM3P20309 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRM3P20309 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
CHRM3P20309 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRM3P20309 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRM3P20309 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.36■□□□□ 0.85
CHRM3P20309 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRM3P20309 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRM3P20309 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRM3P20309 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRM3P20309 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRM3P20309 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRM3P20309 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRM3P20309 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRM3P20309 AC016769.1-201ENST00000409132 1010 ntBASIC20.35■□□□□ 0.85
CHRM3P20309 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CHRM3P20309 KRT18P11-201ENST00000435214 1283 ntBASIC20.35■□□□□ 0.85
CHRM3P20309 AL162430.1-201ENST00000480705 870 ntBASIC20.35■□□□□ 0.85
CHRM3P20309 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.35■□□□□ 0.85
CHRM3P20309 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRM3P20309 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRM3P20309 FEM1AP1-201ENST00000431297 1995 ntBASIC20.35■□□□□ 0.85
CHRM3P20309 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms