Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.39■□□□□ 0.37
HIST1H1DP16402 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HIST1H1DP16402 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HIST1H1DP16402 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H1DP16402 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H1DP16402 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.39■□□□□ 0.37
HIST1H1DP16402 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H1DP16402 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H1DP16402 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H1DP16402 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H1DP16402 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.39■□□□□ 0.37
HIST1H1DP16402 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.39■□□□□ 0.37
HIST1H1DP16402 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HIST1H1DP16402 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H1DP16402 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H1DP16402 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H1DP16402 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H1DP16402 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H1DP16402 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H1DP16402 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H1DP16402 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H1DP16402 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H1DP16402 AL136162.1-201ENST00000607711 1078 ntBASIC17.38■□□□□ 0.37
HIST1H1DP16402 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H1DP16402 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.38■□□□□ 0.37
HIST1H1DP16402 TSPY26P-201ENST00000476365 1326 ntBASIC17.38■□□□□ 0.37
HIST1H1DP16402 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H1DP16402 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HIST1H1DP16402 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.38■□□□□ 0.37
HIST1H1DP16402 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H1DP16402 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H1DP16402 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H1DP16402 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H1DP16402 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H1DP16402 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HIST1H1DP16402 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H1DP16402 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H1DP16402 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HIST1H1DP16402 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H1DP16402 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HIST1H1DP16402 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST1H1DP16402 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H1DP16402 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H1DP16402 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.37■□□□□ 0.37
HIST1H1DP16402 AC008764.7-201ENST00000593779 1081 ntBASIC17.37■□□□□ 0.37
HIST1H1DP16402 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST1H1DP16402 AC135279.3-201ENST00000610945 1311 ntBASIC17.37■□□□□ 0.37
HIST1H1DP16402 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H1DP16402 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H1DP16402 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.37■□□□□ 0.37
HIST1H1DP16402 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H1DP16402 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H1DP16402 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
HIST1H1DP16402 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H1DP16402 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H1DP16402 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H1DP16402 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H1DP16402 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST1H1DP16402 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1DP16402 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1DP16402 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1DP16402 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HIST1H1DP16402 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1DP16402 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1DP16402 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST1H1DP16402 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1DP16402 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1DP16402 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1DP16402 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST1H1DP16402 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HIST1H1DP16402 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.36■□□□□ 0.37
HIST1H1DP16402 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1DP16402 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.35■□□□□ 0.37
HIST1H1DP16402 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1DP16402 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1DP16402 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1DP16402 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1DP16402 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.35■□□□□ 0.37
HIST1H1DP16402 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1DP16402 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HIST1H1DP16402 AC099791.1-201ENST00000416440 715 ntBASIC17.35■□□□□ 0.37
HIST1H1DP16402 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HIST1H1DP16402 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1DP16402 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1DP16402 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1DP16402 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1DP16402 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1DP16402 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1DP16402 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1DP16402 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1DP16402 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1DP16402 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HIST1H1DP16402 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1DP16402 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1DP16402 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1DP16402 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1DP16402 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1DP16402 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1DP16402 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HIST1H1DP16402 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms