Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.63■□□□□ 0.25
DEFA4P12838 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
DEFA4P12838 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
DEFA4P12838 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEFA4P12838 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
DEFA4P12838 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
DEFA4P12838 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DEFA4P12838 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
DEFA4P12838 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.62■□□□□ 0.25
DEFA4P12838 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.62■□□□□ 0.25
DEFA4P12838 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DEFA4P12838 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DEFA4P12838 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
DEFA4P12838 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
DEFA4P12838 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
DEFA4P12838 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DEFA4P12838 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
DEFA4P12838 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.62■□□□□ 0.25
DEFA4P12838 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DEFA4P12838 AL358852.1-201ENST00000623174 1268 ntBASIC16.62■□□□□ 0.25
DEFA4P12838 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DEFA4P12838 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.62■□□□□ 0.25
DEFA4P12838 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DEFA4P12838 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DEFA4P12838 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
DEFA4P12838 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.62■□□□□ 0.25
DEFA4P12838 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DEFA4P12838 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
DEFA4P12838 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DEFA4P12838 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.61■□□□□ 0.25
DEFA4P12838 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
DEFA4P12838 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.61■□□□□ 0.25
DEFA4P12838 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
DEFA4P12838 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.61■□□□□ 0.25
DEFA4P12838 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DEFA4P12838 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DEFA4P12838 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.61■□□□□ 0.25
DEFA4P12838 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DEFA4P12838 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DEFA4P12838 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DEFA4P12838 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DEFA4P12838 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DEFA4P12838 AC012414.1-201ENST00000556676 535 ntBASIC16.61■□□□□ 0.25
DEFA4P12838 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.61■□□□□ 0.25
DEFA4P12838 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
DEFA4P12838 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DEFA4P12838 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
DEFA4P12838 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
DEFA4P12838 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.61■□□□□ 0.25
DEFA4P12838 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.61■□□□□ 0.25
DEFA4P12838 AC055733.4-201ENST00000638462 1354 ntBASIC16.61■□□□□ 0.25
DEFA4P12838 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.61■□□□□ 0.25
DEFA4P12838 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DEFA4P12838 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.61■□□□□ 0.25
DEFA4P12838 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DEFA4P12838 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.61■□□□□ 0.25
DEFA4P12838 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DEFA4P12838 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
DEFA4P12838 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.6■□□□□ 0.25
DEFA4P12838 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.6■□□□□ 0.25
DEFA4P12838 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.6■□□□□ 0.25
DEFA4P12838 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.6■□□□□ 0.25
DEFA4P12838 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.6■□□□□ 0.25
DEFA4P12838 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.6■□□□□ 0.25
DEFA4P12838 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.6■□□□□ 0.25
DEFA4P12838 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.6■□□□□ 0.25
DEFA4P12838 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DEFA4P12838 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DEFA4P12838 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
DEFA4P12838 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
DEFA4P12838 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DEFA4P12838 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.59■□□□□ 0.25
DEFA4P12838 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DEFA4P12838 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DEFA4P12838 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DEFA4P12838 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DEFA4P12838 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DEFA4P12838 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DEFA4P12838 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms