Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
LINGO3P0C6S8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.76■□□□□ 0.75
LINGO3P0C6S8 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.76■□□□□ 0.75
LINGO3P0C6S8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.76■□□□□ 0.75
LINGO3P0C6S8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.76■□□□□ 0.75
LINGO3P0C6S8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LINGO3P0C6S8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINGO3P0C6S8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINGO3P0C6S8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.76■□□□□ 0.75
LINGO3P0C6S8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.76■□□□□ 0.75
LINGO3P0C6S8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINGO3P0C6S8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 AC112907.3-201ENST00000577781 2400 ntBASIC19.74■□□□□ 0.75
LINGO3P0C6S8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.74■□□□□ 0.75
LINGO3P0C6S8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 TSPY26P-201ENST00000476365 1326 ntBASIC19.73■□□□□ 0.75
LINGO3P0C6S8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINGO3P0C6S8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms