Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 GCSHP5-201ENST00000443090 522 ntBASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 AC098590.1-201ENST00000468126 897 ntBASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 AC093827.2-201ENST00000512654 315 ntBASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40ALP0C0E4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RAB40ALP0C0E4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 AC105020.6-201ENST00000621523 1217 ntBASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 AP006294.2-201ENST00000641667 209 ntBASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB40ALP0C0E4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.33■□□□□ 0.69
RAB40ALP0C0E4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB40ALP0C0E4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB40ALP0C0E4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RAB40ALP0C0E4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB40ALP0C0E4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RAB40ALP0C0E4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.33■□□□□ 0.69
RAB40ALP0C0E4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.33■□□□□ 0.69
RAB40ALP0C0E4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB40ALP0C0E4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB40ALP0C0E4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40ALP0C0E4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40ALP0C0E4 RPS2P52-201ENST00000469610 820 ntBASIC19.33■□□□□ 0.68
RAB40ALP0C0E4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.33■□□□□ 0.68
RAB40ALP0C0E4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.33■□□□□ 0.68
RAB40ALP0C0E4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40ALP0C0E4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.33■□□□□ 0.68
RAB40ALP0C0E4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40ALP0C0E4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
RAB40ALP0C0E4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40ALP0C0E4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB40ALP0C0E4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40ALP0C0E4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40ALP0C0E4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 AL137060.1-201ENST00000618151 2648 ntBASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms