Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.88■□□□□ 0.61
THBS1P07996 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
THBS1P07996 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THBS1P07996 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.88■□□□□ 0.61
THBS1P07996 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.88■□□□□ 0.61
THBS1P07996 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
THBS1P07996 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.88■□□□□ 0.61
THBS1P07996 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
THBS1P07996 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
THBS1P07996 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.88■□□□□ 0.61
THBS1P07996 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.88■□□□□ 0.61
THBS1P07996 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.88■□□□□ 0.61
THBS1P07996 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THBS1P07996 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
THBS1P07996 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THBS1P07996 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
THBS1P07996 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
THBS1P07996 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THBS1P07996 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
THBS1P07996 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.88■□□□□ 0.61
THBS1P07996 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
THBS1P07996 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THBS1P07996 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
THBS1P07996 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
THBS1P07996 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
THBS1P07996 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.87■□□□□ 0.61
THBS1P07996 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.87■□□□□ 0.61
THBS1P07996 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 AC007322.3-201ENST00000426526 701 ntBASIC18.87■□□□□ 0.61
THBS1P07996 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.87■□□□□ 0.61
THBS1P07996 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.87■□□□□ 0.61
THBS1P07996 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
THBS1P07996 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.87■□□□□ 0.61
THBS1P07996 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
THBS1P07996 AL121603.2-201ENST00000557373 2117 ntBASIC18.87■□□□□ 0.61
THBS1P07996 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.87■□□□□ 0.61
THBS1P07996 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
THBS1P07996 AC092720.2-201ENST00000602388 1665 ntBASIC18.87■□□□□ 0.61
THBS1P07996 IKBKGP1-201ENST00000612193 1073 ntBASIC18.87■□□□□ 0.61
THBS1P07996 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
THBS1P07996 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS1P07996 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
THBS1P07996 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
THBS1P07996 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS1P07996 AL162377.1-201ENST00000618844 1793 ntBASIC18.86■□□□□ 0.61
THBS1P07996 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.86■□□□□ 0.61
THBS1P07996 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
THBS1P07996 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS1P07996 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.86■□□□□ 0.61
THBS1P07996 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
THBS1P07996 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.86■□□□□ 0.61
THBS1P07996 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
THBS1P07996 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.86■□□□□ 0.61
THBS1P07996 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS1P07996 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.86■□□□□ 0.61
THBS1P07996 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS1P07996 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
THBS1P07996 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS1P07996 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
THBS1P07996 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS1P07996 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
THBS1P07996 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS1P07996 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
THBS1P07996 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
THBS1P07996 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS1P07996 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
THBS1P07996 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.85■□□□□ 0.61
THBS1P07996 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.85■□□□□ 0.61
THBS1P07996 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.85■□□□□ 0.61
THBS1P07996 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
THBS1P07996 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
THBS1P07996 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.85■□□□□ 0.61
THBS1P07996 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS1P07996 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.85■□□□□ 0.61
THBS1P07996 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
THBS1P07996 UBE2DNL-204ENST00000602536 740 ntBASIC18.85■□□□□ 0.61
THBS1P07996 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
THBS1P07996 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
THBS1P07996 MYCNOS-205ENST00000641950 531 ntBASIC18.85■□□□□ 0.61
THBS1P07996 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
THBS1P07996 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS1P07996 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
THBS1P07996 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS1P07996 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS1P07996 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS1P07996 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS1P07996 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms