Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTSDP07339 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTSDP07339 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTSDP07339 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTSDP07339 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.01■□□□□ 0.31
CTSDP07339 AC133561.4-201ENST00000566112 224 ntBASIC17.01■□□□□ 0.31
CTSDP07339 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.01■□□□□ 0.31
CTSDP07339 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTSDP07339 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CTSDP07339 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.01■□□□□ 0.31
CTSDP07339 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CTSDP07339 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CTSDP07339 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.01■□□□□ 0.31
CTSDP07339 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTSDP07339 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTSDP07339 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTSDP07339 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17■□□□□ 0.31
CTSDP07339 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CTSDP07339 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTSDP07339 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CTSDP07339 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17■□□□□ 0.31
CTSDP07339 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17■□□□□ 0.31
CTSDP07339 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CTSDP07339 AL020996.1-203ENST00000536896 2307 ntBASIC17■□□□□ 0.31
CTSDP07339 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17■□□□□ 0.31
CTSDP07339 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17■□□□□ 0.31
CTSDP07339 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CTSDP07339 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17■□□□□ 0.31
CTSDP07339 AC116562.4-201ENST00000641316 2276 ntBASIC17■□□□□ 0.31
CTSDP07339 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTSDP07339 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17■□□□□ 0.31
CTSDP07339 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTSDP07339 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17■□□□□ 0.31
CTSDP07339 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CTSDP07339 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CTSDP07339 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CTSDP07339 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17■□□□□ 0.31
CTSDP07339 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17■□□□□ 0.31
CTSDP07339 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTSDP07339 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTSDP07339 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17■□□□□ 0.31
CTSDP07339 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17■□□□□ 0.31
CTSDP07339 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTSDP07339 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.99■□□□□ 0.31
CTSDP07339 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CTSDP07339 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CTSDP07339 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CTSDP07339 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.99■□□□□ 0.31
CTSDP07339 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CTSDP07339 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTSDP07339 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CTSDP07339 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTSDP07339 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTSDP07339 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTSDP07339 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTSDP07339 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.99■□□□□ 0.31
CTSDP07339 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTSDP07339 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.99■□□□□ 0.31
CTSDP07339 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CTSDP07339 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTSDP07339 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTSDP07339 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTSDP07339 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.99■□□□□ 0.31
CTSDP07339 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CTSDP07339 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CTSDP07339 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTSDP07339 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
CTSDP07339 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTSDP07339 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSDP07339 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSDP07339 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.98■□□□□ 0.31
CTSDP07339 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSDP07339 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.98■□□□□ 0.31
CTSDP07339 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSDP07339 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSDP07339 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.98■□□□□ 0.31
CTSDP07339 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.98■□□□□ 0.31
CTSDP07339 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSDP07339 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.98■□□□□ 0.31
CTSDP07339 AC131212.1-201ENST00000613771 668 ntBASIC16.98■□□□□ 0.31
CTSDP07339 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.98■□□□□ 0.31
CTSDP07339 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.98■□□□□ 0.31
CTSDP07339 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
CTSDP07339 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CTSDP07339 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CTSDP07339 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTSDP07339 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTSDP07339 AP004607.4-201ENST00000530158 1459 ntBASIC16.98■□□□□ 0.31
CTSDP07339 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSDP07339 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.98■□□□□ 0.31
CTSDP07339 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.98■□□□□ 0.31
CTSDP07339 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSDP07339 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTSDP07339 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CTSDP07339 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSDP07339 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSDP07339 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSDP07339 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CTSDP07339 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSDP07339 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms