Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 AL162377.1-201ENST00000618844 1793 ntBASIC18.4■□□□□ 0.54
HLA-DPB1P04440 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 SMUG1P1-201ENST00000590640 811 ntBASIC18.4■□□□□ 0.54
HLA-DPB1P04440 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 AC105233.4-201ENST00000642045 216 ntBASIC18.4■□□□□ 0.54
HLA-DPB1P04440 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DPB1P04440 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HLA-DPB1P04440 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HLA-DPB1P04440 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HLA-DPB1P04440 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
HLA-DPB1P04440 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 MIR572-201ENST00000384983 95 ntBASIC18.39■□□□□ 0.53
HLA-DPB1P04440 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DPB1P04440 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DPB1P04440 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DPB1P04440 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DPB1P04440 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.38■□□□□ 0.53
HLA-DPB1P04440 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DPB1P04440 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DPB1P04440 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DPB1P04440 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DPB1P04440 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DPB1P04440 AP006587.3-201ENST00000525742 1516 ntBASIC18.38■□□□□ 0.53
HLA-DPB1P04440 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
HLA-DPB1P04440 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DPB1P04440 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.38■□□□□ 0.53
HLA-DPB1P04440 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 AC112907.3-201ENST00000577781 2400 ntBASIC18.37■□□□□ 0.53
HLA-DPB1P04440 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DPB1P04440 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HLA-DPB1P04440 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HLA-DPB1P04440 IRS3P-201ENST00000223076 1006 ntBASIC18.36■□□□□ 0.53
HLA-DPB1P04440 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DPB1P04440 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DPB1P04440 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DPB1P04440 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HLA-DPB1P04440 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DPB1P04440 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DPB1P04440 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.36■□□□□ 0.53
HLA-DPB1P04440 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.36■□□□□ 0.53
HLA-DPB1P04440 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms