Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HLA-AP01891 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HLA-AP01891 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-AP01891 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-AP01891 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HLA-AP01891 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HLA-AP01891 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-AP01891 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-AP01891 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-AP01891 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-AP01891 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-AP01891 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HLA-AP01891 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-AP01891 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-AP01891 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
HLA-AP01891 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-AP01891 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-AP01891 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-AP01891 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-AP01891 AC241377.3-202ENST00000626088 1088 ntBASIC17.27■□□□□ 0.36
HLA-AP01891 AC241585.3-202ENST00000628937 1088 ntBASIC17.27■□□□□ 0.36
HLA-AP01891 AC245100.8-202ENST00000629247 1058 ntBASIC17.27■□□□□ 0.36
HLA-AP01891 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-AP01891 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-AP01891 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.27■□□□□ 0.35
HLA-AP01891 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-AP01891 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-AP01891 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-AP01891 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HLA-AP01891 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-AP01891 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HLA-AP01891 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-AP01891 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HLA-AP01891 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HLA-AP01891 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-AP01891 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-AP01891 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-AP01891 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-AP01891 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HLA-AP01891 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-AP01891 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-AP01891 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-AP01891 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-AP01891 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-AP01891 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-AP01891 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-AP01891 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-AP01891 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-AP01891 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-AP01891 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-AP01891 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-AP01891 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-AP01891 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-AP01891 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-AP01891 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HLA-AP01891 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HLA-AP01891 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-AP01891 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-AP01891 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.25■□□□□ 0.35
HLA-AP01891 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-AP01891 pRNA.6-201ENST00000610482 90 ntBASIC17.25■□□□□ 0.35
HLA-AP01891 pRNA.5-201ENST00000612139 90 ntBASIC17.25■□□□□ 0.35
HLA-AP01891 pRNA.11-201ENST00000618423 90 ntBASIC17.25■□□□□ 0.35
HLA-AP01891 pRNA.13-201ENST00000619112 90 ntBASIC17.25■□□□□ 0.35
HLA-AP01891 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-AP01891 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HLA-AP01891 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-AP01891 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-AP01891 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HLA-AP01891 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-AP01891 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-AP01891 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLA-AP01891 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-AP01891 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-AP01891 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-AP01891 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
HLA-AP01891 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-AP01891 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
HLA-AP01891 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-AP01891 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-AP01891 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-AP01891 AP006587.3-201ENST00000525742 1516 ntBASIC17.24■□□□□ 0.35
HLA-AP01891 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-AP01891 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HLA-AP01891 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HLA-AP01891 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-AP01891 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-AP01891 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-AP01891 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-AP01891 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms