Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF2O60811 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF2O60811 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEF2O60811 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PRAMEF2O60811 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEF2O60811 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.25■□□□□ 0.67
PRAMEF2O60811 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF2O60811 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF2O60811 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF2O60811 AC091799.1-201ENST00000422823 811 ntBASIC19.25■□□□□ 0.67
PRAMEF2O60811 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.25■□□□□ 0.67
PRAMEF2O60811 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.25■□□□□ 0.67
PRAMEF2O60811 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
PRAMEF2O60811 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.25■□□□□ 0.67
PRAMEF2O60811 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PRAMEF2O60811 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PRAMEF2O60811 AC121338.2-201ENST00000622535 1744 ntBASIC19.25■□□□□ 0.67
PRAMEF2O60811 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PRAMEF2O60811 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PRAMEF2O60811 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF2O60811 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF2O60811 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF2O60811 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF2O60811 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF2O60811 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PRAMEF2O60811 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF2O60811 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF2O60811 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.24■□□□□ 0.67
PRAMEF2O60811 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.24■□□□□ 0.67
PRAMEF2O60811 TMEM191A-211ENST00000637163 1067 ntBASIC19.24■□□□□ 0.67
PRAMEF2O60811 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF2O60811 AC011484.1-201ENST00000377652 1995 ntBASIC19.24■□□□□ 0.67
PRAMEF2O60811 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF2O60811 AC116050.2-201ENST00000612102 1779 ntBASIC19.24■□□□□ 0.67
PRAMEF2O60811 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF2O60811 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.24■□□□□ 0.67
PRAMEF2O60811 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF2O60811 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEF2O60811 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF2O60811 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF2O60811 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PRAMEF2O60811 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF2O60811 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.23■□□□□ 0.67
PRAMEF2O60811 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF2O60811 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF2O60811 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PRAMEF2O60811 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
PRAMEF2O60811 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF2O60811 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF2O60811 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF2O60811 MIPEPP3-201ENST00000412105 444 ntBASIC19.23■□□□□ 0.67
PRAMEF2O60811 AL512625.2-201ENST00000417533 625 ntBASIC19.23■□□□□ 0.67
PRAMEF2O60811 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.23■□□□□ 0.67
PRAMEF2O60811 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.23■□□□□ 0.67
PRAMEF2O60811 AC098934.4-201ENST00000564127 592 ntBASIC19.23■□□□□ 0.67
PRAMEF2O60811 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.23■□□□□ 0.67
PRAMEF2O60811 AC016405.3-201ENST00000607710 860 ntBASIC19.23■□□□□ 0.67
PRAMEF2O60811 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
PRAMEF2O60811 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF2O60811 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF2O60811 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF2O60811 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF2O60811 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEF2O60811 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF2O60811 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF2O60811 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF2O60811 TSPY20P-201ENST00000450910 630 ntBASIC19.22■□□□□ 0.67
PRAMEF2O60811 CDV3P1-201ENST00000471403 739 ntBASIC19.22■□□□□ 0.67
PRAMEF2O60811 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEF2O60811 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.22■□□□□ 0.67
PRAMEF2O60811 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF2O60811 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF2O60811 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF2O60811 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF2O60811 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF2O60811 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.21■□□□□ 0.67
PRAMEF2O60811 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.21■□□□□ 0.67
PRAMEF2O60811 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF2O60811 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF2O60811 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF2O60811 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF2O60811 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.21■□□□□ 0.67
PRAMEF2O60811 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF2O60811 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.21■□□□□ 0.67
PRAMEF2O60811 AC007322.3-201ENST00000426526 701 ntBASIC19.21■□□□□ 0.67
PRAMEF2O60811 AC093787.1-201ENST00000450396 207 ntBASIC19.21■□□□□ 0.67
PRAMEF2O60811 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.21■□□□□ 0.67
PRAMEF2O60811 AL162412.1-201ENST00000567129 965 ntBASIC19.21■□□□□ 0.67
PRAMEF2O60811 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.21■□□□□ 0.67
PRAMEF2O60811 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF2O60811 AL591742.1-201ENST00000604433 565 ntBASIC19.21■□□□□ 0.67
PRAMEF2O60811 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF2O60811 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
PRAMEF2O60811 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF2O60811 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF2O60811 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.2■□□□□ 0.66
PRAMEF2O60811 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF2O60811 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.2■□□□□ 0.66
PRAMEF2O60811 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PRAMEF2O60811 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms