Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.31■□□□□ 0.84
KLHL41O60662 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.31■□□□□ 0.84
KLHL41O60662 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KLHL41O60662 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.31■□□□□ 0.84
KLHL41O60662 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.31■□□□□ 0.84
KLHL41O60662 AC092437.1-201ENST00000624794 1048 ntBASIC20.31■□□□□ 0.84
KLHL41O60662 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KLHL41O60662 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KLHL41O60662 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KLHL41O60662 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KLHL41O60662 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
KLHL41O60662 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.3■□□□□ 0.84
KLHL41O60662 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KLHL41O60662 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.3■□□□□ 0.84
KLHL41O60662 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KLHL41O60662 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.3■□□□□ 0.84
KLHL41O60662 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.3■□□□□ 0.84
KLHL41O60662 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KLHL41O60662 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KLHL41O60662 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KLHL41O60662 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KLHL41O60662 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
KLHL41O60662 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL41O60662 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL41O60662 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.29■□□□□ 0.84
KLHL41O60662 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL41O60662 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
KLHL41O60662 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL41O60662 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.29■□□□□ 0.84
KLHL41O60662 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.29■□□□□ 0.84
KLHL41O60662 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL41O60662 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL41O60662 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL41O60662 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL41O60662 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.29■□□□□ 0.84
KLHL41O60662 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
KLHL41O60662 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL41O60662 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL41O60662 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL41O60662 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL41O60662 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
KLHL41O60662 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL41O60662 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.28■□□□□ 0.84
KLHL41O60662 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL41O60662 AC121338.2-201ENST00000622535 1744 ntBASIC20.28■□□□□ 0.84
KLHL41O60662 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL41O60662 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL41O60662 AC016769.1-201ENST00000409132 1010 ntBASIC20.28■□□□□ 0.84
KLHL41O60662 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.28■□□□□ 0.84
KLHL41O60662 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.28■□□□□ 0.84
KLHL41O60662 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL41O60662 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.28■□□□□ 0.84
KLHL41O60662 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL41O60662 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.28■□□□□ 0.84
KLHL41O60662 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KLHL41O60662 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.27■□□□□ 0.84
KLHL41O60662 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KLHL41O60662 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KLHL41O60662 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
KLHL41O60662 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.27■□□□□ 0.84
KLHL41O60662 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KLHL41O60662 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KLHL41O60662 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
KLHL41O60662 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.27■□□□□ 0.84
KLHL41O60662 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.27■□□□□ 0.84
KLHL41O60662 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.27■□□□□ 0.84
KLHL41O60662 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KLHL41O60662 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
KLHL41O60662 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KLHL41O60662 BX005040.4-201ENST00000637145 1518 ntBASIC20.27■□□□□ 0.83
KLHL41O60662 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KLHL41O60662 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KLHL41O60662 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL41O60662 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL41O60662 AC112907.3-201ENST00000577781 2400 ntBASIC20.26■□□□□ 0.83
KLHL41O60662 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL41O60662 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL41O60662 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL41O60662 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.26■□□□□ 0.83
KLHL41O60662 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
KLHL41O60662 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL41O60662 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
KLHL41O60662 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.26■□□□□ 0.83
KLHL41O60662 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
KLHL41O60662 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.26■□□□□ 0.83
KLHL41O60662 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KLHL41O60662 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL41O60662 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.26■□□□□ 0.83
KLHL41O60662 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KLHL41O60662 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL41O60662 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
KLHL41O60662 AC020907.5-201ENST00000624372 1936 ntBASIC20.25■□□□□ 0.83
KLHL41O60662 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHL41O60662 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.25■□□□□ 0.83
KLHL41O60662 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.25■□□□□ 0.83
KLHL41O60662 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHL41O60662 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHL41O60662 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHL41O60662 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHL41O60662 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms