Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC28A2O43868 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC28A2O43868 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SLC28A2O43868 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC28A2O43868 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC28A2O43868 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC28A2O43868 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC28A2O43868 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC28A2O43868 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC28A2O43868 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC28A2O43868 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SLC28A2O43868 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC28A2O43868 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC28A2O43868 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLC28A2O43868 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC28A2O43868 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC28A2O43868 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
SLC28A2O43868 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC28A2O43868 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SLC28A2O43868 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC28A2O43868 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC28A2O43868 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC28A2O43868 AP001160.3-201ENST00000601484 763 ntBASIC19.7■□□□□ 0.74
SLC28A2O43868 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLC28A2O43868 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC28A2O43868 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC28A2O43868 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC28A2O43868 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC28A2O43868 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC28A2O43868 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SLC28A2O43868 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A2O43868 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A2O43868 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
SLC28A2O43868 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
SLC28A2O43868 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A2O43868 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC28A2O43868 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A2O43868 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A2O43868 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC28A2O43868 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SLC28A2O43868 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC28A2O43868 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A2O43868 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC28A2O43868 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC28A2O43868 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC28A2O43868 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A2O43868 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC28A2O43868 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SLC28A2O43868 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC28A2O43868 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
SLC28A2O43868 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A2O43868 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SLC28A2O43868 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A2O43868 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A2O43868 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A2O43868 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A2O43868 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC28A2O43868 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A2O43868 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A2O43868 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A2O43868 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.68■□□□□ 0.74
SLC28A2O43868 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A2O43868 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC28A2O43868 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.68■□□□□ 0.74
SLC28A2O43868 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC28A2O43868 AC010536.3-201ENST00000620306 533 ntBASIC19.68■□□□□ 0.74
SLC28A2O43868 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC28A2O43868 AC073912.3-201ENST00000624414 853 ntBASIC19.68■□□□□ 0.74
SLC28A2O43868 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
SLC28A2O43868 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A2O43868 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SLC28A2O43868 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SLC28A2O43868 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC28A2O43868 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A2O43868 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A2O43868 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SLC28A2O43868 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLC28A2O43868 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A2O43868 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A2O43868 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A2O43868 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A2O43868 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A2O43868 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A2O43868 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A2O43868 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A2O43868 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A2O43868 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A2O43868 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A2O43868 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLC28A2O43868 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A2O43868 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.67■□□□□ 0.74
SLC28A2O43868 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SLC28A2O43868 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SLC28A2O43868 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC28A2O43868 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SLC28A2O43868 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A2O43868 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLC28A2O43868 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC28A2O43868 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A2O43868 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms