Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.66■□□□□ 0.42
PHF1O43189 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHF1O43189 AC026471.6-201ENST00000622954 1905 ntBASIC17.66■□□□□ 0.42
PHF1O43189 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHF1O43189 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.66■□□□□ 0.42
PHF1O43189 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PHF1O43189 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PHF1O43189 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHF1O43189 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHF1O43189 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PHF1O43189 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHF1O43189 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHF1O43189 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHF1O43189 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.65■□□□□ 0.42
PHF1O43189 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PHF1O43189 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.65■□□□□ 0.42
PHF1O43189 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PHF1O43189 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHF1O43189 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHF1O43189 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.65■□□□□ 0.42
PHF1O43189 POU5F1P3-201ENST00000428824 1078 ntBASIC17.65■□□□□ 0.42
PHF1O43189 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
PHF1O43189 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PHF1O43189 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PHF1O43189 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.65■□□□□ 0.42
PHF1O43189 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.65■□□□□ 0.42
PHF1O43189 AP001160.3-201ENST00000601484 763 ntBASIC17.65■□□□□ 0.42
PHF1O43189 AC231657.2-201ENST00000624556 255 ntBASIC17.65■□□□□ 0.42
PHF1O43189 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.65■□□□□ 0.42
PHF1O43189 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHF1O43189 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.65■□□□□ 0.42
PHF1O43189 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PHF1O43189 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.64■□□□□ 0.42
PHF1O43189 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.64■□□□□ 0.41
PHF1O43189 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PHF1O43189 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 AC007322.1-201ENST00000426983 750 ntBASIC17.64■□□□□ 0.41
PHF1O43189 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.64■□□□□ 0.41
PHF1O43189 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.64■□□□□ 0.41
PHF1O43189 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.64■□□□□ 0.41
PHF1O43189 ITM2C-210ENST00000620962 501 ntBASIC17.64■□□□□ 0.41
PHF1O43189 AC133041.1-202ENST00000642053 222 ntBASIC17.64■□□□□ 0.41
PHF1O43189 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.64■□□□□ 0.41
PHF1O43189 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PHF1O43189 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHF1O43189 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PHF1O43189 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHF1O43189 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.63■□□□□ 0.41
PHF1O43189 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHF1O43189 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHF1O43189 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHF1O43189 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.63■□□□□ 0.41
PHF1O43189 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.63■□□□□ 0.41
PHF1O43189 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PHF1O43189 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.63■□□□□ 0.41
PHF1O43189 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHF1O43189 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHF1O43189 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHF1O43189 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
PHF1O43189 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PHF1O43189 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PHF1O43189 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
PHF1O43189 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHF1O43189 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHF1O43189 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.62■□□□□ 0.41
PHF1O43189 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHF1O43189 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHF1O43189 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
PHF1O43189 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.62■□□□□ 0.41
PHF1O43189 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PHF1O43189 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.62■□□□□ 0.41
PHF1O43189 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHF1O43189 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PHF1O43189 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHF1O43189 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHF1O43189 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.62■□□□□ 0.41
PHF1O43189 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHF1O43189 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PHF1O43189 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHF1O43189 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHF1O43189 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PHF1O43189 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHF1O43189 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHF1O43189 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHF1O43189 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHF1O43189 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms