Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.39■□□□□ 0.85
PHGDHO43175 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PHGDHO43175 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.39■□□□□ 0.85
PHGDHO43175 AC245052.3-201ENST00000450182 901 ntBASIC20.39■□□□□ 0.85
PHGDHO43175 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.39■□□□□ 0.85
PHGDHO43175 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PHGDHO43175 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.39■□□□□ 0.85
PHGDHO43175 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PHGDHO43175 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHGDHO43175 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PHGDHO43175 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHGDHO43175 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.38■□□□□ 0.85
PHGDHO43175 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
PHGDHO43175 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHGDHO43175 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PHGDHO43175 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHGDHO43175 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.38■□□□□ 0.85
PHGDHO43175 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.38■□□□□ 0.85
PHGDHO43175 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PHGDHO43175 DUX4L2-201ENST00000561772 1275 ntBASIC20.38■□□□□ 0.85
PHGDHO43175 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
PHGDHO43175 DUX4L6-201ENST00000626483 1275 ntBASIC20.38■□□□□ 0.85
PHGDHO43175 DUX4L1-201ENST00000627662 1275 ntBASIC20.38■□□□□ 0.85
PHGDHO43175 DUX4L8-201ENST00000629013 1275 ntBASIC20.38■□□□□ 0.85
PHGDHO43175 DUX4L3-201ENST00000630187 1275 ntBASIC20.38■□□□□ 0.85
PHGDHO43175 DUX4L7-201ENST00000630678 1275 ntBASIC20.38■□□□□ 0.85
PHGDHO43175 DUX4L5-201ENST00000630834 1275 ntBASIC20.38■□□□□ 0.85
PHGDHO43175 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.38■□□□□ 0.85
PHGDHO43175 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.38■□□□□ 0.85
PHGDHO43175 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.38■□□□□ 0.85
PHGDHO43175 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PHGDHO43175 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHGDHO43175 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHGDHO43175 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.38■□□□□ 0.85
PHGDHO43175 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHGDHO43175 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.37■□□□□ 0.85
PHGDHO43175 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHGDHO43175 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHGDHO43175 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.37■□□□□ 0.85
PHGDHO43175 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHGDHO43175 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PHGDHO43175 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PHGDHO43175 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PHGDHO43175 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.37■□□□□ 0.85
PHGDHO43175 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.37■□□□□ 0.85
PHGDHO43175 AP001160.3-201ENST00000601484 763 ntBASIC20.37■□□□□ 0.85
PHGDHO43175 AC120498.10-201ENST00000621827 505 ntBASIC20.37■□□□□ 0.85
PHGDHO43175 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHGDHO43175 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHGDHO43175 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PHGDHO43175 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHGDHO43175 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHGDHO43175 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHGDHO43175 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.36■□□□□ 0.85
PHGDHO43175 AL162377.1-201ENST00000618844 1793 ntBASIC20.36■□□□□ 0.85
PHGDHO43175 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.36■□□□□ 0.85
PHGDHO43175 AFG3L1P-217ENST00000557444 2447 ntBASIC20.36■□□□□ 0.85
PHGDHO43175 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHGDHO43175 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHGDHO43175 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.36■□□□□ 0.85
PHGDHO43175 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PHGDHO43175 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHGDHO43175 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PHGDHO43175 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.36■□□□□ 0.85
PHGDHO43175 TERF1P2-201ENST00000583350 1212 ntBASIC20.36■□□□□ 0.85
PHGDHO43175 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.36■□□□□ 0.85
PHGDHO43175 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.36■□□□□ 0.85
PHGDHO43175 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.36■□□□□ 0.85
PHGDHO43175 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHGDHO43175 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PHGDHO43175 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHGDHO43175 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHGDHO43175 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PHGDHO43175 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.36■□□□□ 0.85
PHGDHO43175 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.36■□□□□ 0.85
PHGDHO43175 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHGDHO43175 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHGDHO43175 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHGDHO43175 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHGDHO43175 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PHGDHO43175 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHGDHO43175 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHGDHO43175 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHGDHO43175 AC123595.1-201ENST00000440769 1046 ntBASIC20.35■□□□□ 0.85
PHGDHO43175 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.35■□□□□ 0.85
PHGDHO43175 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.35■□□□□ 0.85
PHGDHO43175 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.35■□□□□ 0.85
PHGDHO43175 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PHGDHO43175 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.35■□□□□ 0.85
PHGDHO43175 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHGDHO43175 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHGDHO43175 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PHGDHO43175 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.35■□□□□ 0.85
PHGDHO43175 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.34■□□□□ 0.85
PHGDHO43175 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.34■□□□□ 0.85
PHGDHO43175 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PHGDHO43175 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHGDHO43175 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHGDHO43175 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHGDHO43175 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms