Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SRI-203ENST00000419179 1307 ntTSL 2 BASIC28.93■■■□□ 2.22
CHD2O14647 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
CHD2O14647 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC28.93■■■□□ 2.22
CHD2O14647 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
CHD2O14647 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC28.93■■■□□ 2.22
CHD2O14647 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
CHD2O14647 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC28.93■■■□□ 2.22
CHD2O14647 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC28.92■■■□□ 2.22
CHD2O14647 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC28.92■■■□□ 2.22
CHD2O14647 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CHD2O14647 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CHD2O14647 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC28.92■■■□□ 2.22
CHD2O14647 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CHD2O14647 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
CHD2O14647 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CHD2O14647 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC28.92■■■□□ 2.22
CHD2O14647 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC28.92■■■□□ 2.22
CHD2O14647 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CHD2O14647 SAPCD2P4-201ENST00000424595 1171 ntBASIC28.91■■■□□ 2.22
CHD2O14647 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC28.91■■■□□ 2.22
CHD2O14647 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC28.91■■■□□ 2.22
CHD2O14647 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
CHD2O14647 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC28.9■■■□□ 2.22
CHD2O14647 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC28.9■■■□□ 2.22
CHD2O14647 PGM5P4-201ENST00000421970 445 ntBASIC28.9■■■□□ 2.22
CHD2O14647 AL353807.1-201ENST00000427475 662 ntBASIC28.9■■■□□ 2.22
CHD2O14647 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC28.9■■■□□ 2.22
CHD2O14647 REXO1L10P-201ENST00000615707 1290 ntBASIC28.9■■■□□ 2.22
CHD2O14647 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC28.9■■■□□ 2.22
CHD2O14647 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CHD2O14647 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
CHD2O14647 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CHD2O14647 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
CHD2O14647 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
CHD2O14647 AC005521.1-201ENST00000393351 872 ntBASIC28.9■■■□□ 2.22
CHD2O14647 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC28.9■■■□□ 2.22
CHD2O14647 KRT16P5-201ENST00000455284 522 ntBASIC28.9■■■□□ 2.22
CHD2O14647 RPS15-203ENST00000586096 570 ntTSL 2 BASIC28.9■■■□□ 2.22
CHD2O14647 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC28.9■■■□□ 2.22
CHD2O14647 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CHD2O14647 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CHD2O14647 FAM99A-202ENST00000538190 1989 ntBASIC28.89■■■□□ 2.22
CHD2O14647 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC28.89■■■□□ 2.22
CHD2O14647 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CHD2O14647 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC28.89■■■□□ 2.22
CHD2O14647 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
CHD2O14647 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
CHD2O14647 RBM17P1-201ENST00000453646 1190 ntBASIC28.88■■■□□ 2.21
CHD2O14647 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC28.88■■■□□ 2.21
CHD2O14647 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CHD2O14647 AC079598.2-202ENST00000546624 1451 ntBASIC28.88■■■□□ 2.21
CHD2O14647 PKM-204ENST00000449901 2526 ntTSL 2 BASIC28.88■■■□□ 2.21
CHD2O14647 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
CHD2O14647 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC28.88■■■□□ 2.21
CHD2O14647 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CHD2O14647 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CHD2O14647 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CHD2O14647 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC28.87■■■□□ 2.21
CHD2O14647 NME3-204ENST00000563498 920 ntTSL 2 BASIC28.87■■■□□ 2.21
CHD2O14647 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC28.87■■■□□ 2.21
CHD2O14647 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC28.87■■■□□ 2.21
CHD2O14647 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC28.87■■■□□ 2.21
CHD2O14647 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC28.87■■■□□ 2.21
CHD2O14647 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
CHD2O14647 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CHD2O14647 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
CHD2O14647 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
CHD2O14647 BRWD1-AS2-201ENST00000603064 1028 ntBASIC28.87■■■□□ 2.21
CHD2O14647 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CHD2O14647 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CHD2O14647 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
CHD2O14647 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
CHD2O14647 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
CHD2O14647 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CHD2O14647 KRT18P57-201ENST00000443599 1254 ntBASIC28.86■■■□□ 2.21
CHD2O14647 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
CHD2O14647 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC28.86■■■□□ 2.21
CHD2O14647 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CHD2O14647 TPM1-226ENST00000560959 925 ntTSL 2 BASIC28.86■■■□□ 2.21
CHD2O14647 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CHD2O14647 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC28.86■■■□□ 2.21
CHD2O14647 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
CHD2O14647 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHD2O14647 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC28.85■■■□□ 2.21
CHD2O14647 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC28.85■■■□□ 2.21
CHD2O14647 AL121829.2-201ENST00000620908 328 ntBASIC28.85■■■□□ 2.21
CHD2O14647 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHD2O14647 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
CHD2O14647 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHD2O14647 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHD2O14647 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CHD2O14647 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
CHD2O14647 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHD2O14647 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC28.85■■■□□ 2.21
CHD2O14647 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CHD2O14647 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CHD2O14647 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC28.85■■■□□ 2.21
CHD2O14647 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC28.85■■■□□ 2.21
CHD2O14647 TREX2-204ENST00000370212 861 ntTSL 5 BASIC28.85■■■□□ 2.21
CHD2O14647 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms