Protein–RNA interactions for Protein: B4E1H0

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HB4E1H0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SUPT3HB4E1H0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 ZNRF2P3-201ENST00000424200 374 ntBASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.17■□□□□ 0.82
SUPT3HB4E1H0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 AC004854.2-201ENST00000608450 1441 ntBASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HB4E1H0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SUPT3HB4E1H0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SUPT3HB4E1H0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SUPT3HB4E1H0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SUPT3HB4E1H0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.13■□□□□ 0.81
SUPT3HB4E1H0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms