Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01549A6NIU2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LINC01549A6NIU2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.56□□□□□ -0.08
LINC01549A6NIU2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 FP700111.2-201ENST00000619190 1892 ntBASIC14.55□□□□□ -0.08
LINC01549A6NIU2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 YBX1P4-201ENST00000392794 808 ntBASIC14.55□□□□□ -0.08
LINC01549A6NIU2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LINC01549A6NIU2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 MTDHP2-201ENST00000601468 714 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms