Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM235A6NFC5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 TCF3P1-201ENST00000423021 1937 ntBASIC17.47■□□□□ 0.39
TMEM235A6NFC5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM235A6NFC5 SMG8-203ENST00000578922 2178 ntBASIC17.46■□□□□ 0.39
TMEM235A6NFC5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM235A6NFC5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
TMEM235A6NFC5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TMEM235A6NFC5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 AC092720.2-201ENST00000602388 1665 ntBASIC17.45■□□□□ 0.38
TMEM235A6NFC5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms