Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RCCD1A6NED2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.85■■□□□ 1.09
RCCD1A6NED2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RCCD1A6NED2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RCCD1A6NED2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RCCD1A6NED2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RCCD1A6NED2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RCCD1A6NED2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RCCD1A6NED2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RCCD1A6NED2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RCCD1A6NED2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RCCD1A6NED2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.84■■□□□ 1.09
RCCD1A6NED2 AL136967.2-201ENST00000623968 743 ntBASIC21.84■■□□□ 1.09
RCCD1A6NED2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RCCD1A6NED2 AC087289.5-201ENST00000586076 3175 ntBASIC21.84■■□□□ 1.09
RCCD1A6NED2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.84■■□□□ 1.09
RCCD1A6NED2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RCCD1A6NED2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.83■■□□□ 1.09
RCCD1A6NED2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.83■■□□□ 1.09
RCCD1A6NED2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
RCCD1A6NED2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RCCD1A6NED2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.83■■□□□ 1.09
RCCD1A6NED2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.83■■□□□ 1.09
RCCD1A6NED2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.83■■□□□ 1.09
RCCD1A6NED2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RCCD1A6NED2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.83■■□□□ 1.09
RCCD1A6NED2 AC110285.6-201ENST00000617652 491 ntBASIC21.83■■□□□ 1.09
RCCD1A6NED2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RCCD1A6NED2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RCCD1A6NED2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RCCD1A6NED2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RCCD1A6NED2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RCCD1A6NED2 AL355001.2-201ENST00000620617 1191 ntBASIC21.82■■□□□ 1.08
RCCD1A6NED2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.82■■□□□ 1.08
RCCD1A6NED2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RCCD1A6NED2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RCCD1A6NED2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RCCD1A6NED2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RCCD1A6NED2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.82■■□□□ 1.08
RCCD1A6NED2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RCCD1A6NED2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RCCD1A6NED2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.82■■□□□ 1.08
RCCD1A6NED2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
RCCD1A6NED2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RCCD1A6NED2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RCCD1A6NED2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RCCD1A6NED2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RCCD1A6NED2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
RCCD1A6NED2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.81■■□□□ 1.08
RCCD1A6NED2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RCCD1A6NED2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RCCD1A6NED2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RCCD1A6NED2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.81■■□□□ 1.08
RCCD1A6NED2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
RCCD1A6NED2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.81■■□□□ 1.08
RCCD1A6NED2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RCCD1A6NED2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RCCD1A6NED2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RCCD1A6NED2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RCCD1A6NED2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 AL158211.5-201ENST00000623583 2518 ntBASIC21.8■■□□□ 1.08
RCCD1A6NED2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RCCD1A6NED2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.8■■□□□ 1.08
RCCD1A6NED2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RCCD1A6NED2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.8■■□□□ 1.08
RCCD1A6NED2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
RCCD1A6NED2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.8■■□□□ 1.08
RCCD1A6NED2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.8■■□□□ 1.08
RCCD1A6NED2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RCCD1A6NED2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RCCD1A6NED2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RCCD1A6NED2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RCCD1A6NED2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RCCD1A6NED2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RCCD1A6NED2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RCCD1A6NED2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RCCD1A6NED2 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.79■■□□□ 1.08
RCCD1A6NED2 POU5F1P4-201ENST00000413175 1085 ntBASIC21.79■■□□□ 1.08
RCCD1A6NED2 AC091305.1-201ENST00000479476 895 ntBASIC21.79■■□□□ 1.08
RCCD1A6NED2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.79■■□□□ 1.08
RCCD1A6NED2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RCCD1A6NED2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
RCCD1A6NED2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.79■■□□□ 1.08
RCCD1A6NED2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.79■■□□□ 1.08
RCCD1A6NED2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.79■■□□□ 1.08
RCCD1A6NED2 AC116562.4-201ENST00000641316 2276 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms