Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 AC239809.2-201ENST00000415381 517 ntBASIC24.47■■□□□ 1.51
CLRN2A0PK11 AC012618.2-201ENST00000428058 849 ntBASIC24.47■■□□□ 1.51
CLRN2A0PK11 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC24.47■■□□□ 1.51
CLRN2A0PK11 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLRN2A0PK11 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC24.47■■□□□ 1.51
CLRN2A0PK11 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLRN2A0PK11 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC24.47■■□□□ 1.51
CLRN2A0PK11 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLRN2A0PK11 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLRN2A0PK11 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.47■■□□□ 1.51
CLRN2A0PK11 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLRN2A0PK11 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLRN2A0PK11 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CLRN2A0PK11 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
CLRN2A0PK11 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.46■■□□□ 1.51
CLRN2A0PK11 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.46■■□□□ 1.51
CLRN2A0PK11 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CLRN2A0PK11 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC24.46■■□□□ 1.51
CLRN2A0PK11 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC24.46■■□□□ 1.51
CLRN2A0PK11 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CLRN2A0PK11 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC24.46■■□□□ 1.51
CLRN2A0PK11 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLRN2A0PK11 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLRN2A0PK11 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLRN2A0PK11 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLRN2A0PK11 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLRN2A0PK11 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
CLRN2A0PK11 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CLRN2A0PK11 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CLRN2A0PK11 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CLRN2A0PK11 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CLRN2A0PK11 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CLRN2A0PK11 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CLRN2A0PK11 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.45■■□□□ 1.5
CLRN2A0PK11 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CLRN2A0PK11 AC005829.2-201ENST00000571422 1056 ntBASIC24.45■■□□□ 1.5
CLRN2A0PK11 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
CLRN2A0PK11 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CLRN2A0PK11 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.45■■□□□ 1.5
CLRN2A0PK11 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLRN2A0PK11 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CLRN2A0PK11 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLRN2A0PK11 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLRN2A0PK11 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CLRN2A0PK11 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CLRN2A0PK11 KRASP1-201ENST00000407852 552 ntBASIC24.44■■□□□ 1.5
CLRN2A0PK11 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CLRN2A0PK11 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC24.44■■□□□ 1.5
CLRN2A0PK11 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.44■■□□□ 1.5
CLRN2A0PK11 RPS20-210ENST00000523936 899 ntTSL 2 BASIC24.44■■□□□ 1.5
CLRN2A0PK11 BX088651.1-201ENST00000540551 451 ntBASIC24.44■■□□□ 1.5
CLRN2A0PK11 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
CLRN2A0PK11 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.44■■□□□ 1.5
CLRN2A0PK11 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.44■■□□□ 1.5
CLRN2A0PK11 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLRN2A0PK11 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLRN2A0PK11 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.43■■□□□ 1.5
CLRN2A0PK11 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLRN2A0PK11 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLRN2A0PK11 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLRN2A0PK11 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC24.43■■□□□ 1.5
CLRN2A0PK11 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
CLRN2A0PK11 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLRN2A0PK11 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
CLRN2A0PK11 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLRN2A0PK11 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC24.43■■□□□ 1.5
CLRN2A0PK11 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLRN2A0PK11 FAM210CP-201ENST00000445714 574 ntBASIC24.43■■□□□ 1.5
CLRN2A0PK11 ABHD17AP6-201ENST00000458502 1044 ntBASIC24.43■■□□□ 1.5
CLRN2A0PK11 AC133681.1-201ENST00000465482 601 ntBASIC24.43■■□□□ 1.5
CLRN2A0PK11 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.43■■□□□ 1.5
CLRN2A0PK11 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.43■■□□□ 1.5
CLRN2A0PK11 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLRN2A0PK11 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLRN2A0PK11 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLRN2A0PK11 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.43■■□□□ 1.5
CLRN2A0PK11 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.42■■□□□ 1.5
CLRN2A0PK11 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.42■■□□□ 1.5
CLRN2A0PK11 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLRN2A0PK11 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLRN2A0PK11 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CLRN2A0PK11 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CLRN2A0PK11 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLRN2A0PK11 TSPY15P-201ENST00000457163 923 ntBASIC24.42■■□□□ 1.5
CLRN2A0PK11 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CLRN2A0PK11 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CLRN2A0PK11 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CLRN2A0PK11 AL356652.1-201ENST00000615962 565 ntBASIC24.42■■□□□ 1.5
CLRN2A0PK11 AL049637.2-201ENST00000641778 930 ntBASIC24.42■■□□□ 1.5
CLRN2A0PK11 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CLRN2A0PK11 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLRN2A0PK11 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CLRN2A0PK11 MOK-233ENST00000524214 1539 ntTSL 2 BASIC24.41■■□□□ 1.5
CLRN2A0PK11 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CLRN2A0PK11 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.41■■□□□ 1.5
CLRN2A0PK11 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CLRN2A0PK11 MIR1224-201ENST00000408193 85 ntBASIC24.41■■□□□ 1.5
CLRN2A0PK11 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CLRN2A0PK11 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC24.41■■□□□ 1.5
CLRN2A0PK11 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms