Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC020907.5-201ENST00000624372 1936 ntBASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC007322.3-201ENST00000426526 701 ntBASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 CDV3P1-201ENST00000471403 739 ntBASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 MIR6821-201ENST00000617625 74 ntBASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-4A0A1B0GX49 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC091799.1-201ENST00000422823 811 ntBASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 NTF6G-201ENST00000591094 616 ntBASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-4A0A1B0GX49 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV6-4A0A1B0GX49 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.46□□□□□ -0.1
TRBV6-4A0A1B0GX49 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV6-4A0A1B0GX49 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
TRBV6-4A0A1B0GX49 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.46□□□□□ -0.1
TRBV6-4A0A1B0GX49 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.46□□□□□ -0.1
TRBV6-4A0A1B0GX49 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV6-4A0A1B0GX49 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV6-4A0A1B0GX49 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV6-4A0A1B0GX49 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 KRT18P11-201ENST00000435214 1283 ntBASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 MYCNOS-205ENST00000641950 531 ntBASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-4A0A1B0GX49 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 UBE2DNL-204ENST00000602536 740 ntBASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 FAM21FP-204ENST00000608637 956 ntBASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 MIR2861-201ENST00000636310 90 ntBASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 AC092720.2-201ENST00000602388 1665 ntBASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms