Protein–RNA interactions for Protein: A0A1B0GVH6

C13orf42, Chromosome 13 open reading frame 42, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42A0A1B0GVH6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.31■□□□□ 0.36
C13orf42A0A1B0GVH6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C13orf42A0A1B0GVH6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 AL031602.1-201ENST00000633169 911 ntBASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
C13orf42A0A1B0GVH6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 AC120498.9-201ENST00000339021 3867 ntBASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 AL499627.2-201ENST00000606283 725 ntBASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 pRNA.6-201ENST00000610482 90 ntBASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 pRNA.5-201ENST00000612139 90 ntBASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 pRNA.11-201ENST00000618423 90 ntBASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 pRNA.13-201ENST00000619112 90 ntBASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C13orf42A0A1B0GVH6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 AC006455.2-201ENST00000429931 906 ntBASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C13orf42A0A1B0GVH6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 SMG8-203ENST00000578922 2178 ntBASIC17.27■□□□□ 0.36
C13orf42A0A1B0GVH6 AC003102.1-202ENST00000563394 1796 ntBASIC17.27■□□□□ 0.35
C13orf42A0A1B0GVH6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C13orf42A0A1B0GVH6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C13orf42A0A1B0GVH6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.27■□□□□ 0.35
C13orf42A0A1B0GVH6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms