Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
TRAV17A0A0B4J275 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 AC233263.1-201ENST00000578059 224 ntBASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV17A0A0B4J275 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV17A0A0B4J275 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 AL390719.1-204ENST00000412397 1219 ntBASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV17A0A0B4J275 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 ECEL1P1-201ENST00000373592 1742 ntBASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 AC005829.2-201ENST00000571422 1056 ntBASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV17A0A0B4J275 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAV17A0A0B4J275 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms