Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 AC073314.1-201ENST00000568729 2216 ntBASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 FP700111.2-201ENST00000619190 1892 ntBASIC15.23■□□□□ 0.03
TRAV12-3A0A0B4J271 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 AC007225.1-201ENST00000566331 1836 ntBASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV12-3A0A0B4J271 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 AC138907.5-202ENST00000569484 235 ntBASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-3A0A0B4J271 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV12-3A0A0B4J271 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.21■□□□□ 0.02
TRAV12-3A0A0B4J271 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TRAV12-3A0A0B4J271 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV12-3A0A0B4J271 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV12-3A0A0B4J271 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 AC011484.1-201ENST00000377652 1995 ntBASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 AC104187.1-201ENST00000607510 612 ntBASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-3A0A0B4J271 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms