Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 IGHV3-19-201ENST00000521488 291 ntBASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV5A0A0B4J249 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 AC105233.4-201ENST00000642045 216 ntBASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRAV5A0A0B4J249 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 AC061975.6-201ENST00000579045 1553 ntBASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV5A0A0B4J249 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 AL136116.3-201ENST00000402907 1138 ntBASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAV5A0A0B4J249 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms