Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 LINC02228-203ENST00000641970 1355 ntBASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV30A0A087WSZ9 AP005212.1-201ENST00000581547 1997 ntBASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 MIR6084-201ENST00000622012 110 ntBASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV30A0A087WSZ9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 AC105265.2-201ENST00000467189 838 ntBASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV30A0A087WSZ9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV30A0A087WSZ9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 AC010141.2-201ENST00000452426 721 ntBASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 DUX4L2-201ENST00000561772 1275 ntBASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 DUX4L6-201ENST00000626483 1275 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms