Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PCYT1B-203ENST00000379145 5307 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 MON2-214ENST00000641654 10382 ntBASIC9.67□□□□□ -0.86
LMO3Q8TAP4 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 WWC1-209ENST00000521089 3562 ntAPPRIS ALT1 TSL 2 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 OR4K1-202ENST00000641172 1339 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 LCN1P1-201ENST00000372031 505 ntBASIC9.67□□□□□ -0.86
LMO3Q8TAP4 LINC00111-201ENST00000413718 575 ntTSL 3 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 RPL4P5-201ENST00000413888 1276 ntBASIC9.67□□□□□ -0.86
LMO3Q8TAP4 AL121999.1-201ENST00000420156 332 ntTSL 3 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 BX470209.1-201ENST00000421297 916 ntTSL 3 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 AL035250.1-201ENST00000424662 593 ntTSL 2 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 AL356124.1-201ENST00000430296 728 ntTSL 5 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 AL109810.1-201ENST00000435008 495 ntBASIC9.67□□□□□ -0.86
LMO3Q8TAP4 AC130689.1-201ENST00000451056 408 ntBASIC9.67□□□□□ -0.86
LMO3Q8TAP4 AC003666.1-201ENST00000454113 611 ntTSL 3 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 HS6ST2-AS1-201ENST00000455269 550 ntTSL 3 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 NR1I3-219ENST00000504010 944 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 UQCRBP3-201ENST00000509483 312 ntBASIC9.67□□□□□ -0.86
LMO3Q8TAP4 AC022092.1-201ENST00000510230 504 ntTSL 3 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 CACNA1C-AS2-201ENST00000545526 609 ntTSL 2 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 AC005329.2-202ENST00000589673 392 ntTSL 3 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 ZNF678-205ENST00000608949 929 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 CR769775.3-201ENST00000610388 219 ntBASIC9.67□□□□□ -0.86
LMO3Q8TAP4 Metazoa_SRP.162-201ENST00000613066 277 ntBASIC9.67□□□□□ -0.86
LMO3Q8TAP4 AC244255.1-201ENST00000613463 398 ntBASIC9.67□□□□□ -0.86
LMO3Q8TAP4 CDK2AP2P1-201ENST00000617479 328 ntBASIC9.67□□□□□ -0.86
LMO3Q8TAP4 RHAG-203ENST00000618248 1203 ntTSL 5 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 FTX_5.1-201ENST00000618701 218 ntBASIC9.67□□□□□ -0.86
LMO3Q8TAP4 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 NVL-216ENST00000482491 3003 ntTSL 5 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 MARF1-205ENST00000548025 5891 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 CTAGE9-201ENST00000314099 2334 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 ZNF512-202ENST00000379717 3417 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 MAPK10-316ENST00000641430 2285 ntBASIC9.67□□□□□ -0.86
LMO3Q8TAP4 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 CHODL-206ENST00000400135 2136 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 CDHR3-211ENST00000478080 2633 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 AC092652.3-201ENST00000473426 1517 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 MCM3AP-AS1-201ENST00000414659 2539 ntTSL 2 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 THBS3-211ENST00000541990 2928 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 AC025822.2-201ENST00000455199 2287 ntTSL 2 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 SIM1-201ENST00000262901 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 TBC1D8B-201ENST00000276175 3538 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 AL365214.1-201ENST00000404237 997 ntBASIC9.66□□□□□ -0.86
LMO3Q8TAP4 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 AL512635.1-201ENST00000414056 832 ntBASIC9.66□□□□□ -0.86
LMO3Q8TAP4 EIF3KP2-201ENST00000415266 626 ntBASIC9.66□□□□□ -0.86
LMO3Q8TAP4 AC008781.1-201ENST00000422040 621 ntTSL 3 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 AP003064.2-201ENST00000528983 510 ntTSL 3 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 UBB-204ENST00000535788 704 ntTSL 2 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 AC117372.1-201ENST00000548633 620 ntBASIC9.66□□□□□ -0.86
LMO3Q8TAP4 LINC01579-201ENST00000553818 561 ntTSL 4 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 OR7E105P-201ENST00000555893 993 ntBASIC9.66□□□□□ -0.86
LMO3Q8TAP4 AC051619.5-203ENST00000561404 529 ntTSL 4 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 AC015818.2-201ENST00000563569 840 ntBASIC9.66□□□□□ -0.86
LMO3Q8TAP4 RN7SL457P-201ENST00000578760 287 ntBASIC9.66□□□□□ -0.86
LMO3Q8TAP4 LINC00629-202ENST00000592070 844 ntTSL 3 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 ARMCX7P-202ENST00000602449 655 ntBASIC9.66□□□□□ -0.86
LMO3Q8TAP4 NDE1P2-201ENST00000605569 1105 ntBASIC9.66□□□□□ -0.86
LMO3Q8TAP4 ASNSD1-207ENST00000607535 579 ntTSL 3 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 AL513479.1-201ENST00000611376 585 ntBASIC9.66□□□□□ -0.86
LMO3Q8TAP4 Metazoa_SRP.101-201ENST00000611704 303 ntBASIC9.66□□□□□ -0.86
LMO3Q8TAP4 MIR6127-201ENST00000614019 109 ntBASIC9.66□□□□□ -0.86
LMO3Q8TAP4 PIBF1-207ENST00000615625 1098 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 TYW1-201ENST00000359626 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 PDE1A-203ENST00000409365 2034 ntTSL 5 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 TULP3-201ENST00000397132 1951 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 BIVM-ERCC5-201ENST00000602836 5143 ntAPPRIS P5 TSL 1 (best) BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 CCDC47-207ENST00000612558 1586 ntTSL 5 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 AL662907.3-201ENST00000641271 1932 ntBASIC9.66□□□□□ -0.86
LMO3Q8TAP4 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 NR3C2-208ENST00000512865 3822 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 CASP5-202ENST00000393141 1488 ntTSL 5 BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 CDRT1-204ENST00000395906 2571 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
LMO3Q8TAP4 MCTP1-205ENST00000505208 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 DPH3-204ENST00000488423 3131 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 AL354732.1-201ENST00000416416 2080 ntTSL 5 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 DLSTP1-201ENST00000444241 1354 ntBASIC9.65□□□□□ -0.86
LMO3Q8TAP4 PLCH1-204ENST00000460012 6413 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 SPATA13-204ENST00000399949 3026 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 PRR11-201ENST00000262293 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 AL161636.1-201ENST00000427145 2254 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 SYNJ1-206ENST00000433931 4852 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC9.65□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms