Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 OR11K1P-201ENST00000558299 904 ntBASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 AC137800.1-202ENST00000562098 446 ntBASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 INTS6-AS1-204ENST00000593709 648 ntTSL 5 BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 TNFAIP3-210ENST00000620204 3817 ntTSL 5 BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 AL627309.5-203ENST00000466557 1301 ntTSL 5 BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 RAD52-202ENST00000358495 2710 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 IKZF3-205ENST00000350532 1413 ntTSL 5 BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 IKZF3-206ENST00000351680 1413 ntTSL 5 BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 LINC01278-205ENST00000609401 2886 ntTSL 2 BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 IGSF1-201ENST00000361420 4378 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 RPS6KA1-216ENST00000530003 3023 ntTSL 5 BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 PRAMEF10-201ENST00000235347 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 PRAMEF33-201ENST00000437300 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 DHX35-203ENST00000373325 3287 ntTSL 5 BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 CRYZL1-201ENST00000290244 1685 ntTSL 5 BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 PRPF38B-203ENST00000370025 3693 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 MYH10-201ENST00000269243 7662 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 MYH10-203ENST00000379980 7694 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 PLEKHB2-201ENST00000234115 4208 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 SERPINB2-205ENST00000457692 2155 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 WDR93-205ENST00000560294 2293 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 DCLRE1C-209ENST00000378278 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SYCE2Q6PIF2 CCDC36-201ENST00000296449 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 GIT2-205ENST00000457474 5291 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 LINC00265-201ENST00000340510 3049 ntTSL 5 BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 ANKRD20A21P-202ENST00000623715 3588 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 ADGRG1-255ENST00000567835 3741 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 TRAPPC8-211ENST00000582539 4391 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 IL17A-201ENST00000340057 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 RN7SKP204-201ENST00000365481 310 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 C11orf49-202ENST00000378615 1651 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 CXorf21-201ENST00000378962 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 AL136380.2-201ENST00000411837 492 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 ZRANB2-AS2-203ENST00000415780 249 ntTSL 5 BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 AC002367.1-201ENST00000416765 405 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 WRBP1-201ENST00000423352 334 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 NPIPB10P-201ENST00000424293 1354 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 AC016909.2-201ENST00000424510 1711 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 AL109810.1-201ENST00000435008 495 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 AC005588.1-201ENST00000439168 162 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 SEPHS1P6-201ENST00000443084 1179 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 PET100-201ENST00000456958 219 ntTSL 2 BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 RN7SL554P-201ENST00000468197 292 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 RN7SL401P-201ENST00000470065 298 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 RPS10P16-201ENST00000483812 496 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 RPL29P22-201ENST00000498718 459 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 PDE4D-209ENST00000502575 1040 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 AC114786.3-201ENST00000509304 705 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 IGHV3-33-2-201ENST00000517703 346 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 AC124290.2-201ENST00000519431 286 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 GRIA1-213ENST00000521843 3069 ntTSL 2 BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 AC016877.2-201ENST00000522128 1069 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 AC112694.1-201ENST00000541939 570 ntTSL 4 BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 TRIM16-214ENST00000579219 999 ntTSL 2 BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 MIR5003-201ENST00000581891 99 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 RN7SL474P-201ENST00000583485 301 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 AC007785.3-201ENST00000595955 544 ntTSL 5 BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 AC091810.1-201ENST00000603131 325 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 BNIP3P37-201ENST00000604107 901 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 AC008875.1-201ENST00000607715 811 ntBASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 GPC6-202ENST00000617456 792 ntTSL 3 BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 FAM161B-201ENST00000286544 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 KIF1B-205ENST00000377093 7565 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 LILRB2-205ENST00000434421 2773 ntTSL 2 BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 DEPDC5-202ENST00000382112 5363 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SYCE2Q6PIF2 CDCA8-202ENST00000373055 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 ANKRD6-213ENST00000520793 2489 ntTSL 2 BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 NMT1-201ENST00000258960 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 AL359852.1-201ENST00000624609 2197 ntBASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 AC015961.1-201ENST00000589715 2124 ntBASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 ZSWIM2-201ENST00000295131 2091 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 C15orf53-201ENST00000318792 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 SPDYE9P-202ENST00000571071 2024 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 SPDYE11-203ENST00000573748 2024 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 SPDYE10P-201ENST00000576332 2021 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 L3MBTL4-AS1-201ENST00000578427 2044 ntTSL 5 BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 TRIM16L-201ENST00000395671 1982 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 AC010207.1-201ENST00000568384 1946 ntBASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 BTBD16-201ENST00000260723 1849 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 AL109811.4-201ENST00000614757 1793 ntTSL 5 BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 TGIF2-208ENST00000611732 3344 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 BCAT1-204ENST00000538118 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SYCE2Q6PIF2 PSEN1-204ENST00000394164 3046 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms