Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC9.77□□□□□ -0.85
MTHFRP42898 AL365273.1-201ENST00000433113 587 ntTSL 2 BASIC9.77□□□□□ -0.85
MTHFRP42898 AC064862.2-201ENST00000445460 196 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC9.77□□□□□ -0.85
MTHFRP42898 AF186996.8-201ENST00000463158 907 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 AC008481.2-201ENST00000483614 531 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 PTPN20-215ENST00000505814 1244 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 SNORA68.4-201ENST00000516649 129 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 IGKV3-25-201ENST00000523155 253 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 PRR13-210ENST00000551003 1009 ntAPPRIS ALT2 TSL 3 BASIC9.77□□□□□ -0.85
MTHFRP42898 AC089998.4-201ENST00000552532 459 ntTSL 3 BASIC9.77□□□□□ -0.85
MTHFRP42898 AL442663.4-201ENST00000555304 289 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 HLA-P-207ENST00000568192 747 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC9.77□□□□□ -0.85
MTHFRP42898 AP002840.2-201ENST00000602900 640 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 AL133351.4-201ENST00000604204 631 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 AL022345.3-201ENST00000611406 228 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 MIR6083-201ENST00000612737 106 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 ATF3-210ENST00000613104 581 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 LINC01943-201ENST00000625410 559 ntTSL 2 BASIC9.77□□□□□ -0.85
MTHFRP42898 CPSF7-226ENST00000626926 306 ntTSL 5 BASIC9.77□□□□□ -0.85
MTHFRP42898 CES5A-203ENST00000518005 2092 ntTSL 2 BASIC9.77□□□□□ -0.85
MTHFRP42898 SMARCD1-205ENST00000548573 2095 ntTSL 5 BASIC9.77□□□□□ -0.85
MTHFRP42898 LINC01278-205ENST00000609401 2886 ntTSL 2 BASIC9.77□□□□□ -0.85
MTHFRP42898 OPCML-207ENST00000541867 6277 ntTSL 5 BASIC9.77□□□□□ -0.85
MTHFRP42898 OPCML-208ENST00000612177 6250 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
MTHFRP42898 LANCL1-201ENST00000233714 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
MTHFRP42898 CACNB2-202ENST00000324631 3446 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 CDC25C-201ENST00000323760 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 ZFP30-202ENST00000392144 3916 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
MTHFRP42898 OGDH-206ENST00000447398 3474 ntTSL 5 BASIC9.77□□□□□ -0.85
MTHFRP42898 EAPP-201ENST00000250454 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 NFYC-201ENST00000308733 2158 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 OR2A20P-204ENST00000641121 2173 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 OR3A1-201ENST00000323404 1650 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
MTHFRP42898 SYT6-202ENST00000607941 4352 ntTSL 2 BASIC9.77□□□□□ -0.85
MTHFRP42898 MPV17-202ENST00000357186 2011 ntTSL 2 BASIC9.77□□□□□ -0.85
MTHFRP42898 TPTE-201ENST00000427445 2036 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 PNPLA1-201ENST00000312917 1518 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 POC5-211ENST00000510798 1524 ntTSL 2 BASIC9.77□□□□□ -0.85
MTHFRP42898 PARL-212ENST00000639100 1513 ntTSL 5 BASIC9.77□□□□□ -0.85
MTHFRP42898 PPM1A-201ENST00000325642 1713 ntTSL 2 BASIC9.76□□□□□ -0.85
MTHFRP42898 APTX-207ENST00000397172 1740 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 EMP1-201ENST00000256951 5921 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 DNALI1-201ENST00000296218 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 TPP1-215ENST00000533371 3536 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 RBM26-AS1-201ENST00000456602 1756 ntTSL 2 BASIC9.76□□□□□ -0.85
MTHFRP42898 PSEN1-204ENST00000394164 3046 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 SOX9-AS1-204ENST00000434703 3032 ntTSL 2 BASIC9.76□□□□□ -0.85
MTHFRP42898 ADAMTS12-203ENST00000504830 8774 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 C14orf159-211ENST00000518868 3075 ntAPPRIS ALT1 TSL 2 BASIC9.76□□□□□ -0.85
MTHFRP42898 MYT1L-203ENST00000407844 3642 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 SNORA68B-201ENST00000364518 133 ntBASIC9.76□□□□□ -0.85
MTHFRP42898 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
MTHFRP42898 AL353604.1-201ENST00000413901 596 ntTSL 3 BASIC9.76□□□□□ -0.85
MTHFRP42898 PDCL3P6-201ENST00000429744 706 ntBASIC9.76□□□□□ -0.85
MTHFRP42898 AC007237.1-201ENST00000442074 499 ntBASIC9.76□□□□□ -0.85
MTHFRP42898 AC103563.4-201ENST00000454384 368 ntBASIC9.76□□□□□ -0.85
MTHFRP42898 RPL12P8-201ENST00000482081 580 ntBASIC9.76□□□□□ -0.85
MTHFRP42898 AC010457.1-202ENST00000510137 337 ntTSL 2 BASIC9.76□□□□□ -0.85
MTHFRP42898 AC099509.2-201ENST00000513926 406 ntTSL 3 BASIC9.76□□□□□ -0.85
MTHFRP42898 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC9.76□□□□□ -0.85
MTHFRP42898 AP001767.3-201ENST00000533329 436 ntTSL 5 BASIC9.76□□□□□ -0.85
MTHFRP42898 TMIGD1-202ENST00000538566 1124 ntTSL 2 BASIC9.76□□□□□ -0.85
MTHFRP42898 AC020892.2-201ENST00000557891 387 ntTSL 3 BASIC9.76□□□□□ -0.85
MTHFRP42898 PLCB2-AS1-201ENST00000559520 568 ntTSL 3 BASIC9.76□□□□□ -0.85
MTHFRP42898 AC007922.1-201ENST00000583122 459 ntTSL 2 BASIC9.76□□□□□ -0.85
MTHFRP42898 MIR3187-201ENST00000583431 70 ntBASIC9.76□□□□□ -0.85
MTHFRP42898 AC008474.1-201ENST00000589127 573 ntTSL 4 BASIC9.76□□□□□ -0.85
MTHFRP42898 AL161725.1-211ENST00000592805 889 ntTSL 5 BASIC9.76□□□□□ -0.85
MTHFRP42898 HINT1P2-201ENST00000604731 235 ntBASIC9.76□□□□□ -0.85
MTHFRP42898 AC114810.1-201ENST00000607415 473 ntBASIC9.76□□□□□ -0.85
MTHFRP42898 ASNSD1-207ENST00000607535 579 ntTSL 3 BASIC9.76□□□□□ -0.85
MTHFRP42898 AC009237.16-201ENST00000612987 506 ntBASIC9.76□□□□□ -0.85
MTHFRP42898 TCEAL4-213ENST00000613326 1166 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
MTHFRP42898 Metazoa_SRP.132-201ENST00000619251 285 ntBASIC9.76□□□□□ -0.85
MTHFRP42898 MIR6754-201ENST00000621121 66 ntBASIC9.76□□□□□ -0.85
MTHFRP42898 C17orf80-206ENST00000577615 2049 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
MTHFRP42898 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 SLC6A15-211ENST00000552192 2221 ntTSL 2 BASIC9.76□□□□□ -0.85
MTHFRP42898 LINC01120-201ENST00000437751 1861 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 IL15-203ENST00000394159 1545 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 TNFAIP3-210ENST00000620204 3817 ntTSL 5 BASIC9.76□□□□□ -0.85
MTHFRP42898 NPHP1-202ENST00000355301 1932 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 TROVE2-202ENST00000367443 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 AC010207.1-201ENST00000568384 1946 ntBASIC9.76□□□□□ -0.85
MTHFRP42898 RBM22-201ENST00000199814 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 LTN1-203ENST00000389195 2714 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 ABI1-205ENST00000376139 3516 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 AFAP1L2-201ENST00000304129 3705 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
MTHFRP42898 SIDT2-203ENST00000431081 3910 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 SPATA22-209ENST00000572969 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 DCTN4-215ENST00000627368 1774 ntTSL 5 BASIC9.75□□□□□ -0.85
MTHFRP42898 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC9.75□□□□□ -0.85
MTHFRP42898 ELAVL4-201ENST00000357083 1442 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 S100A7A-203ENST00000368729 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms