Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 KDM4D-203ENST00000610872 2191 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
MTHFRP42898 TTC31-202ENST00000410003 3358 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
MTHFRP42898 PPM1L-202ENST00000464260 2735 ntTSL 2 BASIC9.81□□□□□ -0.84
MTHFRP42898 ECM2-201ENST00000344604 3253 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
MTHFRP42898 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
MTHFRP42898 NPHP1-207ENST00000445609 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
MTHFRP42898 TRO-208ENST00000420798 3613 ntTSL 2 BASIC9.81□□□□□ -0.84
MTHFRP42898 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
MTHFRP42898 FAM161B-201ENST00000286544 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
MTHFRP42898 BTN3A1-202ENST00000289361 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
MTHFRP42898 HCG18-242ENST00000602319 3342 ntBASIC9.81□□□□□ -0.84
MTHFRP42898 LINC01964-201ENST00000567718 3137 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 AC002090.1-201ENST00000625000 2138 ntBASIC9.8□□□□□ -0.84
MTHFRP42898 ITGBL1-201ENST00000376162 2007 ntTSL 2 BASIC9.8□□□□□ -0.84
MTHFRP42898 LINC02042-201ENST00000481624 2022 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 EARS2-207ENST00000563459 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 LINC02280-201ENST00000564585 3816 ntTSL 2 BASIC9.8□□□□□ -0.84
MTHFRP42898 LYPD4-203ENST00000609812 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 FAM86EP-201ENST00000313946 2845 ntTSL 2 BASIC9.8□□□□□ -0.84
MTHFRP42898 MEIS1-212ENST00000495021 2836 ntTSL 2 BASIC9.8□□□□□ -0.84
MTHFRP42898 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC9.8□□□□□ -0.84
MTHFRP42898 ICA1-205ENST00000401396 1742 ntTSL 5 BASIC9.8□□□□□ -0.84
MTHFRP42898 NSMAF-201ENST00000038176 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 MYRIP-210ENST00000539167 4635 ntTSL 2 BASIC9.8□□□□□ -0.84
MTHFRP42898 AC073263.1-202ENST00000401851 924 ntBASIC9.8□□□□□ -0.84
MTHFRP42898 MAPRE3-202ENST00000402218 1001 ntTSL 5 BASIC9.8□□□□□ -0.84
MTHFRP42898 TIA1-204ENST00000416149 821 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC9.8□□□□□ -0.84
MTHFRP42898 LINC01830-201ENST00000450551 636 ntTSL 5 BASIC9.8□□□□□ -0.84
MTHFRP42898 AC013472.1-202ENST00000455081 558 ntTSL 3 BASIC9.8□□□□□ -0.84
MTHFRP42898 AC110768.2-201ENST00000506540 329 ntBASIC9.8□□□□□ -0.84
MTHFRP42898 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC9.8□□□□□ -0.84
MTHFRP42898 AC006499.1-201ENST00000511870 850 ntBASIC9.8□□□□□ -0.84
MTHFRP42898 AC018410.1-202ENST00000545474 492 ntTSL 2 BASIC9.8□□□□□ -0.84
MTHFRP42898 AC012150.1-201ENST00000553075 593 ntTSL 4 BASIC9.8□□□□□ -0.84
MTHFRP42898 PSMA3-AS1-210ENST00000556002 1039 ntTSL 2 BASIC9.8□□□□□ -0.84
MTHFRP42898 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC9.8□□□□□ -0.84
MTHFRP42898 AC118754.2-201ENST00000574133 537 ntTSL 4 BASIC9.8□□□□□ -0.84
MTHFRP42898 RN7SL670P-201ENST00000577235 294 ntBASIC9.8□□□□□ -0.84
MTHFRP42898 MIR3650-201ENST00000581972 60 ntBASIC9.8□□□□□ -0.84
MTHFRP42898 FXYD5-211ENST00000590686 862 ntAPPRIS P2 TSL 3 BASIC9.8□□□□□ -0.84
MTHFRP42898 Metazoa_SRP.58-201ENST00000618720 282 ntBASIC9.8□□□□□ -0.84
MTHFRP42898 AL355987.5-201ENST00000621585 411 ntBASIC9.8□□□□□ -0.84
MTHFRP42898 AC087645.3-201ENST00000624708 587 ntBASIC9.8□□□□□ -0.84
MTHFRP42898 OLMALINC-206ENST00000641799 1195 ntBASIC9.8□□□□□ -0.84
MTHFRP42898 HNRNPA1L2-201ENST00000357495 3011 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
MTHFRP42898 ARHGEF3-202ENST00000338458 3639 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 CFLAR-215ENST00000457277 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 TOX4P1-201ENST00000514955 1862 ntBASIC9.8□□□□□ -0.84
MTHFRP42898 CLNK-202ENST00000442825 1539 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
MTHFRP42898 AC138904.1-201ENST00000501520 2481 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 AHNAK2-204ENST00000557457 3436 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 NEK1-203ENST00000507142 5556 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC9.8□□□□□ -0.84
MTHFRP42898 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 AC237221.2-201ENST00000624231 2537 ntBASIC9.8□□□□□ -0.84
MTHFRP42898 MTCL1-207ENST00000518815 3963 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 FOXN4-201ENST00000299162 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 TNFRSF11B-201ENST00000297350 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MTHFRP42898 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 SLC4A4-205ENST00000512686 2316 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 TCF4-254ENST00000626584 1701 ntTSL 5 BASIC9.79□□□□□ -0.84
MTHFRP42898 AL445309.1-201ENST00000607565 1989 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 SIN3A-201ENST00000360439 5050 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
MTHFRP42898 LINC00606-201ENST00000412578 2869 ntTSL 2 BASIC9.79□□□□□ -0.84
MTHFRP42898 DLSTP1-201ENST00000444241 1354 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 TRIM51-202ENST00000449290 1629 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
MTHFRP42898 AC131935.2-201ENST00000623649 1371 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 A4GNT-201ENST00000236709 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 RN7SKP87-201ENST00000364096 301 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 HMGB1P39-201ENST00000366304 880 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 MIR5689HG-201ENST00000366312 656 ntTSL 3 BASIC9.79□□□□□ -0.84
MTHFRP42898 WFDC3-203ENST00000372630 597 ntTSL 3 BASIC9.79□□□□□ -0.84
MTHFRP42898 CER1-201ENST00000380911 1215 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 HEATR5A-201ENST00000382464 507 ntTSL 2 BASIC9.79□□□□□ -0.84
MTHFRP42898 CES5AP1-201ENST00000400418 859 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 LYPLA2P3-201ENST00000417429 576 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 RPL12P14-201ENST00000431782 490 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 ASH2LP1-201ENST00000438037 985 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 AC093582.1-201ENST00000447086 385 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 AP000266.1-201ENST00000450936 582 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 DEFT1P-201ENST00000453425 496 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 CENPS-202ENST00000462462 584 ntTSL 3 BASIC9.79□□□□□ -0.84
MTHFRP42898 AC048341.1-201ENST00000480482 403 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 RN7SL702P-201ENST00000488394 292 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 GAPDHP47-201ENST00000489113 999 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 AC136628.1-201ENST00000503218 561 ntTSL 4 BASIC9.79□□□□□ -0.84
MTHFRP42898 HPYR1-201ENST00000520457 982 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 LINC01300-202ENST00000521073 796 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 AC087521.3-202ENST00000526408 743 ntTSL 5 BASIC9.79□□□□□ -0.84
MTHFRP42898 AL022318.2-201ENST00000558766 258 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 LINC01444-202ENST00000581211 654 ntTSL 3 BASIC9.79□□□□□ -0.84
MTHFRP42898 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms