Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
CDC42BPBQ9Y5S2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 TSPY15P-201ENST00000457163 923 ntBASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 ABHD17AP6-201ENST00000458502 1044 ntBASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 PENK-204ENST00000518770 863 ntTSL 2 BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CDC42BPBQ9Y5S2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDC42BPBQ9Y5S2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CDC42BPBQ9Y5S2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC31.42■■■□□ 2.62
CDC42BPBQ9Y5S2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC31.42■■■□□ 2.62
CDC42BPBQ9Y5S2 REXO1L12P-201ENST00000622156 912 ntBASIC31.42■■■□□ 2.62
CDC42BPBQ9Y5S2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CDC42BPBQ9Y5S2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
CDC42BPBQ9Y5S2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 RCN1P1-201ENST00000400413 996 ntBASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC31.41■■■□□ 2.62
CDC42BPBQ9Y5S2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CDC42BPBQ9Y5S2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC31.4■■■□□ 2.62
CDC42BPBQ9Y5S2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC31.4■■■□□ 2.62
CDC42BPBQ9Y5S2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CDC42BPBQ9Y5S2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CDC42BPBQ9Y5S2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC31.4■■■□□ 2.62
CDC42BPBQ9Y5S2 RARRES2P10-201ENST00000564312 460 ntBASIC31.4■■■□□ 2.62
CDC42BPBQ9Y5S2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CDC42BPBQ9Y5S2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CDC42BPBQ9Y5S2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC31.39■■■□□ 2.62
CDC42BPBQ9Y5S2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CDC42BPBQ9Y5S2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC31.39■■■□□ 2.62
CDC42BPBQ9Y5S2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC31.39■■■□□ 2.62
CDC42BPBQ9Y5S2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC31.39■■■□□ 2.62
CDC42BPBQ9Y5S2 AC110285.5-201ENST00000611501 352 ntBASIC31.39■■■□□ 2.62
CDC42BPBQ9Y5S2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CDC42BPBQ9Y5S2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CDC42BPBQ9Y5S2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CDC42BPBQ9Y5S2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
CDC42BPBQ9Y5S2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
CDC42BPBQ9Y5S2 KRT18P21-201ENST00000515767 1272 ntBASIC31.38■■■□□ 2.61
CDC42BPBQ9Y5S2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC31.38■■■□□ 2.61
CDC42BPBQ9Y5S2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CDC42BPBQ9Y5S2 MIR4785-201ENST00000585005 73 ntBASIC31.38■■■□□ 2.61
CDC42BPBQ9Y5S2 AC120498.8-201ENST00000614275 531 ntBASIC31.38■■■□□ 2.61
CDC42BPBQ9Y5S2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CDC42BPBQ9Y5S2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CDC42BPBQ9Y5S2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CDC42BPBQ9Y5S2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
CDC42BPBQ9Y5S2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC31.38■■■□□ 2.61
CDC42BPBQ9Y5S2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC31.38■■■□□ 2.61
CDC42BPBQ9Y5S2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC31.38■■■□□ 2.61
CDC42BPBQ9Y5S2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CDC42BPBQ9Y5S2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CDC42BPBQ9Y5S2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CDC42BPBQ9Y5S2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CDC42BPBQ9Y5S2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC31.37■■■□□ 2.61
CDC42BPBQ9Y5S2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CDC42BPBQ9Y5S2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CDC42BPBQ9Y5S2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CDC42BPBQ9Y5S2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC31.37■■■□□ 2.61
CDC42BPBQ9Y5S2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CDC42BPBQ9Y5S2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
CDC42BPBQ9Y5S2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
CDC42BPBQ9Y5S2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CDC42BPBQ9Y5S2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CDC42BPBQ9Y5S2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CDC42BPBQ9Y5S2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC31.36■■■□□ 2.61
CDC42BPBQ9Y5S2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC31.36■■■□□ 2.61
CDC42BPBQ9Y5S2 PGM5P4-201ENST00000421970 445 ntBASIC31.36■■■□□ 2.61
CDC42BPBQ9Y5S2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC31.36■■■□□ 2.61
CDC42BPBQ9Y5S2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CDC42BPBQ9Y5S2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CDC42BPBQ9Y5S2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms