Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LRCH1Q9Y2L9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.52■□□□□ 0.72
LRCH1Q9Y2L9 AC005332.7-201ENST00000614046 2005 ntBASIC19.52■□□□□ 0.72
LRCH1Q9Y2L9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRCH1Q9Y2L9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
LRCH1Q9Y2L9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRCH1Q9Y2L9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRCH1Q9Y2L9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.52■□□□□ 0.71
LRCH1Q9Y2L9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRCH1Q9Y2L9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCH1Q9Y2L9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.5■□□□□ 0.71
LRCH1Q9Y2L9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LRCH1Q9Y2L9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH1Q9Y2L9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LRCH1Q9Y2L9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH1Q9Y2L9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH1Q9Y2L9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH1Q9Y2L9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LRCH1Q9Y2L9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.5■□□□□ 0.71
LRCH1Q9Y2L9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
LRCH1Q9Y2L9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH1Q9Y2L9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.5■□□□□ 0.71
LRCH1Q9Y2L9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 MIR4787-201ENST00000607364 84 ntBASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 AP004607.7-201ENST00000527152 1677 ntBASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.49■□□□□ 0.71
LRCH1Q9Y2L9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH1Q9Y2L9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 AC021242.3-201ENST00000607598 1377 ntBASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 AC121338.2-201ENST00000622535 1744 ntBASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms