Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF6Q9Y252 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF6Q9Y252 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF6Q9Y252 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF6Q9Y252 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF6Q9Y252 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF6Q9Y252 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF6Q9Y252 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF6Q9Y252 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
RNF6Q9Y252 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF6Q9Y252 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF6Q9Y252 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF6Q9Y252 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF6Q9Y252 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF6Q9Y252 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF6Q9Y252 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF6Q9Y252 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RNF6Q9Y252 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF6Q9Y252 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF6Q9Y252 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF6Q9Y252 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF6Q9Y252 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RNF6Q9Y252 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF6Q9Y252 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF6Q9Y252 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF6Q9Y252 AC006970.2-201ENST00000450065 779 ntBASIC19.29■□□□□ 0.68
RNF6Q9Y252 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.29■□□□□ 0.68
RNF6Q9Y252 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF6Q9Y252 AP005212.1-201ENST00000581547 1997 ntBASIC19.29■□□□□ 0.68
RNF6Q9Y252 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF6Q9Y252 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF6Q9Y252 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
RNF6Q9Y252 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF6Q9Y252 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF6Q9Y252 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF6Q9Y252 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF6Q9Y252 KRT18P11-201ENST00000435214 1283 ntBASIC19.28■□□□□ 0.68
RNF6Q9Y252 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF6Q9Y252 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF6Q9Y252 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF6Q9Y252 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF6Q9Y252 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF6Q9Y252 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF6Q9Y252 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF6Q9Y252 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF6Q9Y252 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF6Q9Y252 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF6Q9Y252 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF6Q9Y252 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF6Q9Y252 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF6Q9Y252 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF6Q9Y252 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF6Q9Y252 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF6Q9Y252 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF6Q9Y252 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF6Q9Y252 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF6Q9Y252 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF6Q9Y252 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF6Q9Y252 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF6Q9Y252 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF6Q9Y252 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF6Q9Y252 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF6Q9Y252 CROCCP5-201ENST00000436658 830 ntBASIC19.27■□□□□ 0.68
RNF6Q9Y252 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.27■□□□□ 0.68
RNF6Q9Y252 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF6Q9Y252 AC104771.1-201ENST00000603335 964 ntBASIC19.27■□□□□ 0.68
RNF6Q9Y252 AC011767.1-201ENST00000617410 1153 ntBASIC19.27■□□□□ 0.68
RNF6Q9Y252 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF6Q9Y252 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF6Q9Y252 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF6Q9Y252 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RNF6Q9Y252 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF6Q9Y252 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
RNF6Q9Y252 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RNF6Q9Y252 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
RNF6Q9Y252 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RNF6Q9Y252 AC073314.1-201ENST00000568729 2216 ntBASIC19.27■□□□□ 0.67
RNF6Q9Y252 AL391422.3-201ENST00000603791 2761 ntBASIC19.27■□□□□ 0.67
RNF6Q9Y252 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.27■□□□□ 0.67
RNF6Q9Y252 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.27■□□□□ 0.67
RNF6Q9Y252 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF6Q9Y252 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF6Q9Y252 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF6Q9Y252 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF6Q9Y252 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF6Q9Y252 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF6Q9Y252 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RNF6Q9Y252 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF6Q9Y252 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.26■□□□□ 0.67
RNF6Q9Y252 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF6Q9Y252 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RNF6Q9Y252 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF6Q9Y252 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF6Q9Y252 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RNF6Q9Y252 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF6Q9Y252 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF6Q9Y252 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF6Q9Y252 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF6Q9Y252 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF6Q9Y252 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms