Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC31.98■■■□□ 2.71
CDK11AQ9UQ88 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
CDK11AQ9UQ88 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CDK11AQ9UQ88 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CDK11AQ9UQ88 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CDK11AQ9UQ88 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CDK11AQ9UQ88 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CDK11AQ9UQ88 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CDK11AQ9UQ88 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CDK11AQ9UQ88 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC31.97■■■□□ 2.71
CDK11AQ9UQ88 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CDK11AQ9UQ88 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC31.97■■■□□ 2.71
CDK11AQ9UQ88 REXO1L12P-201ENST00000622156 912 ntBASIC31.97■■■□□ 2.71
CDK11AQ9UQ88 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CDK11AQ9UQ88 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
CDK11AQ9UQ88 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CDK11AQ9UQ88 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CDK11AQ9UQ88 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
CDK11AQ9UQ88 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
CDK11AQ9UQ88 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC31.96■■■□□ 2.71
CDK11AQ9UQ88 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CDK11AQ9UQ88 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CDK11AQ9UQ88 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC31.96■■■□□ 2.71
CDK11AQ9UQ88 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CDK11AQ9UQ88 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CDK11AQ9UQ88 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CDK11AQ9UQ88 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CDK11AQ9UQ88 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC31.95■■■□□ 2.71
CDK11AQ9UQ88 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CDK11AQ9UQ88 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
CDK11AQ9UQ88 THEM4-205ENST00000489410 643 ntTSL 2 BASIC31.95■■■□□ 2.71
CDK11AQ9UQ88 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CDK11AQ9UQ88 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC31.95■■■□□ 2.71
CDK11AQ9UQ88 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC31.95■■■□□ 2.71
CDK11AQ9UQ88 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
CDK11AQ9UQ88 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CDK11AQ9UQ88 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.7
CDK11AQ9UQ88 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CDK11AQ9UQ88 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CDK11AQ9UQ88 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
CDK11AQ9UQ88 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CDK11AQ9UQ88 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC31.94■■■□□ 2.7
CDK11AQ9UQ88 ECEL1P3-201ENST00000427961 737 ntBASIC31.94■■■□□ 2.7
CDK11AQ9UQ88 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC31.94■■■□□ 2.7
CDK11AQ9UQ88 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC31.94■■■□□ 2.7
CDK11AQ9UQ88 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 AC211429.1-201ENST00000415277 523 ntBASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 AC239809.2-201ENST00000415381 517 ntBASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 AL023875.1-201ENST00000640777 796 ntBASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC31.93■■■□□ 2.7
CDK11AQ9UQ88 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 AP001412.1-201ENST00000608405 714 ntBASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 AL356652.1-201ENST00000615962 565 ntBASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 C9orf163-202ENST00000624034 2573 ntBASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC31.92■■■□□ 2.7
CDK11AQ9UQ88 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CDK11AQ9UQ88 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC31.91■■■□□ 2.7
CDK11AQ9UQ88 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CDK11AQ9UQ88 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDK11AQ9UQ88 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDK11AQ9UQ88 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDK11AQ9UQ88 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC31.91■■■□□ 2.7
CDK11AQ9UQ88 KRT17P2-201ENST00000300992 1314 ntBASIC31.91■■■□□ 2.7
CDK11AQ9UQ88 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC31.91■■■□□ 2.7
CDK11AQ9UQ88 AL135905.2-201ENST00000584934 1404 ntBASIC31.91■■■□□ 2.7
CDK11AQ9UQ88 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CDK11AQ9UQ88 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
CDK11AQ9UQ88 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC31.9■■■□□ 2.7
CDK11AQ9UQ88 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC31.9■■■□□ 2.7
CDK11AQ9UQ88 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC31.9■■■□□ 2.7
CDK11AQ9UQ88 RPS20-210ENST00000523936 899 ntTSL 2 BASIC31.9■■■□□ 2.7
CDK11AQ9UQ88 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC31.9■■■□□ 2.7
CDK11AQ9UQ88 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC31.9■■■□□ 2.7
CDK11AQ9UQ88 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CDK11AQ9UQ88 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC31.9■■■□□ 2.7
CDK11AQ9UQ88 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC31.9■■■□□ 2.7
CDK11AQ9UQ88 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC31.9■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms