Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 CD99P1-205ENST00000527459 561 ntBASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
UBQLN1Q9UMX0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
UBQLN1Q9UMX0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
UBQLN1Q9UMX0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
UBQLN1Q9UMX0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
UBQLN1Q9UMX0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
UBQLN1Q9UMX0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
UBQLN1Q9UMX0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
UBQLN1Q9UMX0 AC087633.2-202ENST00000565166 1439 ntBASIC22.14■■□□□ 1.13
UBQLN1Q9UMX0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 AC083880.1-201ENST00000608266 535 ntBASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBQLN1Q9UMX0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 PGM5P4-201ENST00000421970 445 ntBASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 AC105020.6-201ENST00000621523 1217 ntBASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
UBQLN1Q9UMX0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
UBQLN1Q9UMX0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
UBQLN1Q9UMX0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.11■■□□□ 1.13
UBQLN1Q9UMX0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
UBQLN1Q9UMX0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
UBQLN1Q9UMX0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
UBQLN1Q9UMX0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
UBQLN1Q9UMX0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
UBQLN1Q9UMX0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBQLN1Q9UMX0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBQLN1Q9UMX0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.1■■□□□ 1.13
UBQLN1Q9UMX0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.1■■□□□ 1.13
UBQLN1Q9UMX0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBQLN1Q9UMX0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.1■■□□□ 1.13
UBQLN1Q9UMX0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBQLN1Q9UMX0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBQLN1Q9UMX0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
UBQLN1Q9UMX0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.1■■□□□ 1.13
UBQLN1Q9UMX0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.09■■□□□ 1.13
UBQLN1Q9UMX0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBQLN1Q9UMX0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.09■■□□□ 1.13
UBQLN1Q9UMX0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
UBQLN1Q9UMX0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.09■■□□□ 1.13
UBQLN1Q9UMX0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
UBQLN1Q9UMX0 AC121338.2-201ENST00000622535 1744 ntBASIC22.09■■□□□ 1.13
UBQLN1Q9UMX0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
UBQLN1Q9UMX0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
UBQLN1Q9UMX0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
UBQLN1Q9UMX0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
UBQLN1Q9UMX0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
UBQLN1Q9UMX0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
UBQLN1Q9UMX0 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.08■■□□□ 1.13
UBQLN1Q9UMX0 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.08■■□□□ 1.13
UBQLN1Q9UMX0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.08■■□□□ 1.13
UBQLN1Q9UMX0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.08■■□□□ 1.13
UBQLN1Q9UMX0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.08■■□□□ 1.13
UBQLN1Q9UMX0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.08■■□□□ 1.13
UBQLN1Q9UMX0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
UBQLN1Q9UMX0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.08■■□□□ 1.12
UBQLN1Q9UMX0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
UBQLN1Q9UMX0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms